RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 V9GYY5 206 aaPredicted RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 MUC3AQ02505 3323 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 CD160O95971 181 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 GAS8O95995 478 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 KRT14P02533 472 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 SOX9P48436 509 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 DGKGP49619 791 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 IFI35P80217 286 aaPredicted RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 GEN1Q17RS7 908 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 TIGD7Q6NT04 549 aaPredicted RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 MAATS1Q7Z4T9 603 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 CCDC110Q8TBZ0 833 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 UHRF1Q96T88 793 aaPredicted RBP21.95■■□□□ 1.1
TPM1-204ENST00000334895 CD320Q9NPF0 282 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 SLC27A6Q9Y2P4 619 aa21.95■■□□□ 1.1
TPM1-204ENST00000334895 C5orf60A6NFR6 353 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 FAM187AA6NFU0 413 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 ZSCAN5CA6NGD5 496 aaPredicted RBP21.94■■□□□ 1.1
TPM1-204ENST00000334895 C19orf67A6NJJ6 358 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 RHOXF2BP0C7M4 288 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 CCNB1P14635 433 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 SLC10A7Q0GE19 358 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 PTK6Q13882 451 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 GLE1Q53GS7 698 aaKnown RBP21.94■■□□□ 1.1
TPM1-204ENST00000334895 IL12RB2Q99665 862 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 HINFPQ9BQA5 517 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 RHOXF2Q9BQY4 288 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 EPC1Q9H2F5 836 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 PCDH9Q9HC56 1237 aa21.94■■□□□ 1.1
TPM1-204ENST00000334895 MTSS1O43312 755 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 NARSO43776 548 aaKnown RBP21.93■■□□□ 1.1
TPM1-204ENST00000334895 GCATO75600 419 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 JCHAINP01591 159 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 RPL22P35268 128 aaKnown RBP21.93■■□□□ 1.1
TPM1-204ENST00000334895 PPP1R7Q15435 360 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 LINGO4Q6UY18 593 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 ZNF567Q8N184 647 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 CNTD1Q8N815 330 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 CCDC89Q8N998 374 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 USP33Q8TEY7 942 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 C2orf49Q9BVC5 232 aaPredicted RBP21.93■■□□□ 1.1
TPM1-204ENST00000334895 TRPV5Q9NQA5 729 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 HPCAL4Q9UM19 191 aa21.93■■□□□ 1.1
TPM1-204ENST00000334895 A0A0A0MRY4 1105 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 BHMG1C9JSJ3 638 aaPredicted RBP21.92■■□□□ 1.1
TPM1-204ENST00000334895 CTSOP43234 321 aaPredicted RBP21.92■■□□□ 1.1
TPM1-204ENST00000334895 HNRNPDQ14103 355 aaKnown RBP21.92■■□□□ 1.1
TPM1-204ENST00000334895 NAA30Q147X3 362 aaPredicted RBP21.92■■□□□ 1.1
TPM1-204ENST00000334895 ERCC6LQ2NKX8 1250 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 P3H1Q32P28 736 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 TEX44Q53QW1 395 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 ANKRD20A2Q5SQ80 823 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 ANKRD20A1Q5TYW2 823 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 ANKRD20A3Q5VUR7 823 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 GRAMD4Q6IC98 578 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 SYDE1Q6ZW31 735 aaPredicted RBP21.92■■□□□ 1.1
TPM1-204ENST00000334895 SFTPA1Q8IWL2 248 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 AHI1Q8N157 1196 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 TEX26Q8N6G2 289 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 CSGALNACT1Q8TDX6 532 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 ACDQ96AP0 544 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 SPATA13Q96N96 652 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 ZNF599Q96NL3 588 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 DEC1Q9P2X7 70 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 TTC28Q96AY4 2481 aa21.92■■□□□ 1.1
TPM1-204ENST00000334895 HEXIM1O94992 359 aaKnown RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 MT-CO1P00395 513 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 IVDP26440 423 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 CD68P34810 354 aaPredicted RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 VPS41P49754 854 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 KDSRQ06136 332 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 DMC1Q14565 340 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 IER5LQ5T953 404 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 TMCO4Q5TGY1 634 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 GJD3Q8N144 294 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 ERP44Q9BS26 406 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 ANKZF1Q9H8Y5 726 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 UBA2Q9UBT2 640 aaPredicted RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 MYO18AQ92614 2054 aaKnown RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 PRRT4C9JH25 899 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 ZNF189O75820 626 aaPredicted RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 HLA-DQB2P05538 268 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 EIF2DP41214 584 aaKnown RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 LBRQ14739 615 aaKnown RBP21.91■■□□□ 1.1
TPM1-204ENST00000334895 TRADDQ15628 312 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 MBLAC2Q68D91 279 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 PGBD5Q8N414 524 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 UBXN4Q92575 508 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 DNASE1L2Q92874 299 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 TTC17Q96AE7 1141 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 TEKT5Q96M29 485 aa21.91■■□□□ 1.1
TPM1-204ENST00000334895 RBM22Q9NW64 420 aaKnown RBP eCLIP21.91■■□□□ 1.1
TPM1-204ENST00000334895 MUSKO15146 869 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 ZBTB24O43167 697 aaPredicted RBP21.9■■□□□ 1.1
TPM1-204ENST00000334895 OPHN1O60890 802 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 TDGQ13569 410 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 CYTH1Q15438 398 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 MARC1Q5VT66 337 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 DUPD1Q68J44 220 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 TAB3Q8N5C8 712 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms