RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 E2F7Q96AV8 911 aa9.19□□□□□ -0.94
COPB2-201ENST00000333188 PHF21BQ96EK2 531 aa9.19□□□□□ -0.94
COPB2-201ENST00000333188 RPL10LQ96L21 214 aaKnown RBP9.19□□□□□ -0.94
COPB2-201ENST00000333188 UPF3AQ9H1J1 476 aaKnown RBP9.19□□□□□ -0.94
COPB2-201ENST00000333188 FAM96AQ9H5X1 160 aa9.19□□□□□ -0.94
COPB2-201ENST00000333188 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
COPB2-201ENST00000333188 SCN4AP35499 1836 aa9.19□□□□□ -0.94
COPB2-201ENST00000333188 ZMPSTE24O75844 475 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ITGA2BP08514 1039 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 RPSAP08865 295 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 ITGB6P18564 788 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 GKP32189 559 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PTPN7P35236 360 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ATP5C1P36542 298 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 MAGEA9P43362 315 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 AQP5P55064 265 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 WNT3AP56704 352 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 SMAD3P84022 425 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 USP4Q13107 963 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 CSHL1Q14406 222 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 CCDC6Q16204 474 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 NLRP9Q7RTR0 991 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ALYREFQ86V81 257 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 FAXDC2Q96IV6 333 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 MLPHQ9BV36 600 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 FRMD8P1Q9BZ68 369 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 LRRC40Q9H9A6 602 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 A0A096LPK6 155 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 AURKAO14965 403 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 DGKIO75912 1065 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ASMTLO95671 621 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PEX6Q13608 980 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 DPYSQ14117 519 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 CBX2Q14781 532 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 TRIM71Q2Q1W2 868 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 PACS1Q6VY07 963 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ZNF534Q76KX8 674 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 FAM126BQ8IXS8 530 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ATP6V0D2Q8N8Y2 350 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 CCDC124Q96CT7 223 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 PRR11Q96HE9 360 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 CORO1BQ9BR76 489 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ATP13A1Q9HD20 1204 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 UTP6Q9NYH9 597 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 PRKAG2Q9UGJ0 569 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ZFP37Q9Y6Q3 630 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 LOC285556D6RIA3 1793 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 SHROOM3Q8TF72 1996 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 NDC80O14777 642 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PER2O15055 1255 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 SNAP91O60641 907 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 HSPA4LO95757 839 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 URODP06132 367 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PRSS56P0CW18 603 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 COG7P83436 770 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
COPB2-201ENST00000333188 MGAT5Q09328 741 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 STX3Q13277 289 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 VEPH1Q14D04 833 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 USP41Q3LFD5 358 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 ANKRD20A4Q4UJ75 823 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 MS4A13Q5J8X5 152 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 NAPEPLDQ6IQ20 393 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PLD6Q8N2A8 252 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 SKA2Q8WVK7 121 aaPredicted RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 MARK4Q96L34 752 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 TLR9Q9NR96 1032 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 TRPM5Q9NZQ8 1165 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 VPS28Q9UK41 221 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 RUVBL2Q9Y230 463 aaKnown RBP9.18□□□□□ -0.94
COPB2-201ENST00000333188 FAM50BQ9Y247 325 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 PCDHA11Q9Y5I1 949 aa9.18□□□□□ -0.94
COPB2-201ENST00000333188 NEMP2A6NFY4 417 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 M0QZQ0 153 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 ABHD2P08910 425 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 CTPS1P17812 591 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 HDCP19113 662 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 CORO1AP31146 461 aaKnown RBP9.17□□□□□ -0.94
COPB2-201ENST00000333188 CDH17Q12864 832 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 HABP4Q5JVS0 413 aaKnown RBP9.17□□□□□ -0.94
COPB2-201ENST00000333188 NAPRTQ6XQN6 538 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 MYLK4Q86YV6 388 aaPredicted RBP9.17□□□□□ -0.94
COPB2-201ENST00000333188 CRLF3Q8IUI8 442 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 KCTD4Q8WVF5 259 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 MCUR1Q96AQ8 359 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 APOPT1Q96IL0 206 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 TEKT5Q96M29 485 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 CASD1Q96PB1 797 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 SLC22A12Q96S37 553 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 TBL1YQ9BQ87 522 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 ZYG11BQ9C0D3 744 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.17□□□□□ -0.94
COPB2-201ENST00000333188 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
COPB2-201ENST00000333188 BRWD1Q9NSI6 2320 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms