RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ERCC2P18074 760 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 DNA2P51530 1060 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 NDST2P52849 883 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CDH6P55285 790 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 GSDMDP57764 484 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 ARF5P84085 180 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CREB5Q02930 508 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CST6Q15828 149 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 ODF2Q5BJF6 829 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 FAM46CQ5VWP2 391 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 LYSMD4Q5XG99 296 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 ARMCX6Q7L4S7 300 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 TMEFF1Q8IYR6 380 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 UMODL1-AS1Q8N2C9 162 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 TXLNBQ8N3L3 684 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 GPR161Q8N6U8 529 aaKnown RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 FRMD1Q8N878 549 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 FRS2Q8WU20 508 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 TOE1Q96GM8 510 aaKnown RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CELF6Q96J87 481 aaKnown RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 OMDQ99983 421 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CEP44Q9C0F1 390 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 PABPC3Q9H361 631 aaKnown RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 CWC15Q9P013 229 aaKnown RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 MBD1Q9UIS9 605 aaPredicted RBP16.73■□□□□ 0.27
C11orf88-201ENST00000332814 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
C11orf88-201ENST00000332814 MEI4A8MW99 385 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 K7ERQ8 282 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 SPOPO43791 374 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 ZMPSTE24O75844 475 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 FECHP22830 423 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 DPP6P42658 865 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 SPEM2Q0P670 501 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 SPDYCQ5MJ68 293 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 RYBPQ8N488 228 aaPredicted RBP16.72■□□□□ 0.27
C11orf88-201ENST00000332814 LZTR1Q8N653 840 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 PCDH20Q8N6Y1 951 aaKnown RBP16.72■□□□□ 0.27
C11orf88-201ENST00000332814 KCTD6Q8NC69 237 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 HMCESQ96FZ2 354 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 GPR174Q9BXC1 333 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 CALN1Q9BXU9 219 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 BTBD1Q9H0C5 482 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 ARRDC1-AS1Q9H2J1 176 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 PCDH18Q9HCL0 1135 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 CD93Q9NPY3 652 aa16.72■□□□□ 0.27
C11orf88-201ENST00000332814 RCOR3Q9P2K3 495 aaPredicted RBP16.72■□□□□ 0.27
C11orf88-201ENST00000332814 FCF1Q9Y324 198 aaKnown RBP16.72■□□□□ 0.27
C11orf88-201ENST00000332814 DFFAO00273 331 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 MCF2LO15068 1137 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 MID1O15344 667 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 RNASEH2AO75792 299 aaKnown RBP16.71■□□□□ 0.27
C11orf88-201ENST00000332814 IGLV3-19P01714 112 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 C5AR1P21730 350 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 SLC8A1P32418 973 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 SERPINB6P35237 376 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 MPLP40238 635 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 SLC1A1P43005 524 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.27
C11orf88-201ENST00000332814 PDK2Q15119 407 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 TXNRD3NBQ6F5E7 133 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 LEKR1Q6ZMV7 388 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 KIAA1328Q86T90 577 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 DCLK2Q8N568 766 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 DEFB119Q8N690 84 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 CASKIN2Q8WXE0 1202 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 FOXJ1Q92949 421 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 CSPG4P5Q96PW8 444 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 TNKS2Q9H2K2 1166 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 NOL6Q9H6R4 1146 aaKnown RBP16.71■□□□□ 0.27
C11orf88-201ENST00000332814 SP110Q9HB58 689 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 DYRK4Q9NR20 520 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 KLHL11Q9NVR0 708 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 FBXL12Q9NXK8 326 aa16.71■□□□□ 0.27
C11orf88-201ENST00000332814 WSB2Q9NYS7 404 aaPredicted RBP16.71■□□□□ 0.27
C11orf88-201ENST00000332814 CKAP5Q14008 2032 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 A0A1W2PP55 124 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 SMAD6O43541 496 aaKnown RBP16.7■□□□□ 0.26
C11orf88-201ENST00000332814 LRP3O75074 770 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 PRNPP04156 253 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 AMPD1P23109 780 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 TAS2R40P59535 323 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 ZNF33AQ06730 810 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 SERINC3Q13530 473 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 DPYSQ14117 519 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 TCEAL1Q15170 157 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 CARD16Q5EG05 197 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 WDR45BQ5MNZ6 344 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 RGL4Q8IZJ4 473 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 HDDC3Q8N4P3 179 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 OR2A12Q8NGT7 310 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 PIP4K2CQ8TBX8 421 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 GRIN3AQ8TCU5 1115 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 PIGKQ92643 395 aa16.7■□□□□ 0.26
C11orf88-201ENST00000332814 PPP1R16AQ96I34 528 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms