RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 DCAKDQ8WVC6 231 aa17.45■□□□□ 0.38
PRKCD-201ENST00000330452 C12orf43Q96C57 262 aaKnown RBP17.45■□□□□ 0.38
PRKCD-201ENST00000330452 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
PRKCD-201ENST00000330452 NMUR2Q9GZQ4 415 aa17.45■□□□□ 0.38
PRKCD-201ENST00000330452 TP63Q9H3D4 680 aaPredicted RBP17.45■□□□□ 0.38
PRKCD-201ENST00000330452 MTO1Q9Y2Z2 717 aaKnown RBP17.45■□□□□ 0.38
PRKCD-201ENST00000330452 E7ESA3 106 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 MYO1DO94832 1006 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 FKBP9O95302 570 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 APOC2P02655 101 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 KRT6CP48668 564 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 IRX4P78413 519 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 PPP2R2BQ00005 443 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 MBTD1Q05BQ5 628 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ITGADQ13349 1161 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 COL19A1Q14993 1142 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 OXA1LQ15070 435 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 CELF3Q5SZQ8 465 aaKnown RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 FAM102AQ5T9C2 384 aaPredicted RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 RALGPS2Q86X27 583 aaPredicted RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 PDIK1LQ8N165 341 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ISOC1Q96CN7 298 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 PIWIL1Q96J94 861 aaKnown RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ACAP3Q96P50 834 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 DHRS4Q9BTZ2 278 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 HERC2P3Q9BVR0 1158 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 NDFIP2Q9NV92 336 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 STK39Q9UEW8 545 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 LAMA3Q16787 3333 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 GRAP2O75791 330 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 GABBR2O75899 941 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 RAG1P15918 1043 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ELK3P41970 407 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ALDH1A3P47895 512 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 P2RX3P56373 397 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 CTBSQ01459 385 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 PDK1Q15118 436 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ZNF512Q96ME7 567 aaPredicted RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 PPCSQ9HAB8 311 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 CFAP99D6REC4 459 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 KPNA4O00629 521 aaPredicted RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 XPO1O14980 1071 aaKnown RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 AVILO75366 819 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 TPTEP56180 551 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 NIPAL4Q0D2K0 466 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 CDO1Q16878 200 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 LSM12Q3MHD2 195 aaKnown RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 TRNP1Q6NT89 227 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ZNF276Q8N554 614 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 LINC00469Q8N7U9 141 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 TMEM176AQ96HP8 235 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 HEXIM2Q96MH2 286 aaKnown RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ZNF641Q96N77 438 aaPredicted RBP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 FERMT1Q9BQL6 677 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRKCD-201ENST00000330452 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
PRKCD-201ENST00000330452 H3BNX3 289 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CILPO75339 1184 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CSPG5O95196 566 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 TXNP10599 105 aaKnown RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 GPD2P43304 727 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CDH6P55285 790 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CDK18Q07002 472 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 MOGQ16653 247 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 KLHL38Q2WGJ6 581 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 LRRN4Q8WUT4 740 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 MCRS1Q96EZ8 462 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 OXNAD1Q96HP4 312 aaPredicted RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 PCDH12Q9NPG4 1184 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 SQORQ9Y6N5 450 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CAPN14A8MX76 684 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 ENPP3O14638 875 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 GAS2O43903 313 aaKnown RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 MAP3K6O95382 1288 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 ZNF286BP0CG31 522 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 RABGAP1LQ5R372 815 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 GALNT13Q8IUC8 556 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 BANPQ8N9N5 519 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CPB2Q96IY4 423 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 CIB1Q99828 191 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 FRMD8P1Q9BZ68 369 aaPredicted RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 WDR6Q9NNW5 1121 aaKnown RBP17.43■□□□□ 0.38
PRKCD-201ENST00000330452 RNF19AQ9NV58 838 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 DSEQ9UL01 958 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 B3GNT3Q9Y2A9 372 aa17.43■□□□□ 0.38
PRKCD-201ENST00000330452 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 KLHL41O60662 606 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 GMNNO75496 209 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 BMPR1AP36894 532 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 KDSRQ06136 332 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
PRKCD-201ENST00000330452 ADAMTS16Q8TE57 1224 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms