RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PDPK2PQ6A1A2 396 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 SCD5Q86SK9 330 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 ZNF598Q86UK7 904 aaKnown RBP14.82□□□□□ -0.04
TPM3-206ENST00000330188 SPATA2LQ8IUW3 424 aaPredicted RBP14.82□□□□□ -0.04
TPM3-206ENST00000330188 TBL1YQ9BQ87 522 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 SLC39A8Q9C0K1 460 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 FAM96AQ9H5X1 160 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 GLOD4Q9HC38 313 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 NDFIP2Q9NV92 336 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 APOBEC2Q9Y235 224 aaKnown RBP14.82□□□□□ -0.04
TPM3-206ENST00000330188 PCDHB12Q9Y5F1 795 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 CCDC78A2IDD5 438 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 FGF10O15520 208 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 KRT36O76013 467 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 GRIK1P39086 918 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 IDH3AP50213 366 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 GRM3Q14832 879 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 LZTR1Q8N653 840 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 KLHDC9Q8NEP7 349 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 FCRL2Q96LA5 508 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 GPR22Q99680 433 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 CATSPERBQ9H7T0 1116 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 LRRC42Q9Y546 428 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 FRMPD3Q5JV73 1810 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 MATN3O15232 486 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 PSMG1O95456 288 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 FLT3LGP49771 235 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 CLNS1AP54105 237 aaKnown RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 CACNB2Q08289 660 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 RCN1Q15293 331 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 TAF11Q15544 211 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 TRIM71Q2Q1W2 868 aaKnown RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 ANO4Q32M45 955 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 DNAL1Q4LDG9 190 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 PCID2Q5JVF3 399 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 CCSAPQ6IQ19 270 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 DENND5AQ6IQ26 1287 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 PKN3Q6P5Z2 889 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 NAPRTQ6XQN6 538 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 ZC3HC1Q86WB0 502 aaKnown RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 OXCT2Q9BYC2 517 aaPredicted RBP14.81□□□□□ -0.04
TPM3-206ENST00000330188 C1orf21Q9H246 121 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 NMUR1Q9HB89 426 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 NMRAL1Q9HBL8 299 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 NSMCE4AQ9NXX6 385 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 PCDHB8Q9UN66 801 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 TTC3P53804 2025 aa14.81□□□□□ -0.04
TPM3-206ENST00000330188 ARHGEF37A1IGU5 675 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 INPPL1O15357 1258 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 B4GALT3O60512 393 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 SIN3BO75182 1162 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 TM7SF2O76062 418 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 KLHL2O95198 593 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 OR4Q2P0C623 313 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 SKIP12755 728 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 HADHAP40939 763 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 FCGRTP55899 365 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 YWHAHQ04917 246 aaPredicted RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 PPP2R5DQ14738 602 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 VWA5B1Q5TIE3 1220 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 AFMIDQ63HM1 303 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 SCUBE1Q8IWY4 988 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 MAB21L3Q8N8X9 362 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 IPMKQ8NFU5 416 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 FICDQ9BVA6 458 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 C1QTNF1Q9BXJ1 281 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 RHOJQ9H4E5 214 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 NUDT5Q9UKK9 219 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 SLC39A10Q9ULF5 831 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 FAM155AB1AL88 458 aaPredicted RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 E9PAM4 449 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 ANXA9O76027 345 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 GABRB3P28472 473 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 GCKP35557 465 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 CPOXP36551 454 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 FAM26DQ5JW98 314 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 C14orf80Q86SX3 495 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 NAF1Q96HR8 494 aaKnown RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 MYCBPQ99417 103 aaPredicted RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 CDH19Q9H159 772 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 TRMT13Q9NUP7 481 aaKnown RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 STOML1Q9UBI4 398 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 HS3ST4Q9Y661 456 aa14.8□□□□□ -0.04
TPM3-206ENST00000330188 MRPL42Q9Y6G3 142 aaKnown RBP14.8□□□□□ -0.04
TPM3-206ENST00000330188 PLXNA3P51805 1871 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 KCNU1A8MYU2 1149 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 TMEM114B3SHH9 223 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 TRIM13O60858 407 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 MOCS2O96007 188 aaPredicted RBP14.79□□□□□ -0.04
TPM3-206ENST00000330188 HLA-DQB2P05538 268 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 MYL4P12829 197 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 CCND3P30281 292 aaPredicted RBP14.79□□□□□ -0.04
TPM3-206ENST00000330188 ADRA1AP35348 466 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms