RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 TBC1D3DA0A087WVF3 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3IA0A087WXS9 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3EA0A087X179 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3KA0A087X1G2 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3FA6NER0 549 aaPredicted RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3LB9A6J9 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 EPHB6O15197 1021 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 MAGEC1O60732 1142 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 RNGTTO60942 597 aaKnown RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 GFPT2O94808 682 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 PRNPP04156 253 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3HP0C7X1 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 CHRNB2P17787 502 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 OR1E1P30953 314 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 STAT1P42224 750 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 RXRGP48443 463 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 METAP1P53582 386 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 PPP2CBP62714 309 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 PPP2CAP67775 309 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 MYL5Q02045 173 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 MANEALQ5VSG8 457 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3GQ6DHY5 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3CQ6IPX1 549 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 STRADAQ7RTN6 431 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TMPRSS7Q7RTY8 843 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 TBC1D3Q8IZP1 549 aaPredicted RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 OR2A12Q8NGT7 310 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 SLC20A1Q8WUM9 679 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 CENPIQ92674 756 aaPredicted RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 SERAC1Q96JX3 654 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 ZYG11BQ9C0D3 744 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 GDF3Q9NR23 364 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 AASDHPPTQ9NRN7 309 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 FANCLQ9NW38 375 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 BTBD3Q9Y2F9 522 aa13.9□□□□□ -0.18
GTF3C6-201ENST00000329970 A0A0D9SEW6 157 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 GOLGA8SH3BPF8 625 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 SNAP91O60641 907 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 RTN2O75298 545 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 ZMPSTE24O75844 475 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 MT-CO1P00395 513 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 CTSLP07711 333 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 ZNF18P17022 549 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 SDC4P31431 198 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 CHRNA3P32297 505 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 ETFBP38117 255 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 NUMBP49757 651 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 KLK7P49862 253 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 NXPH1P58417 271 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 CNTN1Q12860 1018 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PTP4A2Q12974 167 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 STX1AQ16623 288 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 ARL13BQ3SXY8 428 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 SETMARQ53H47 684 aaPredicted RBP13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PIP5KL1Q5T9C9 394 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 RETSATQ6NUM9 610 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 C22orf39Q6P5X5 142 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 FAM131BQ86XD5 332 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PLPP6Q8IY26 295 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 OSBPL2Q9H1P3 480 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 TMPRSS4Q9NRS4 437 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 MPP6Q9NZW5 540 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PCDHGA1Q9Y5H4 931 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 SNX10Q9Y5X0 201 aa13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 TDRD6O60522 2096 aaKnown RBP13.89□□□□□ -0.19
GTF3C6-201ENST00000329970 PRAMEF26H0Y7S4 382 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 TLR4O00206 839 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 KCNK3O14649 394 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 WNT9AO14904 365 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 ADRA1BP35368 520 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 MAPKAPK2P49137 400 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 SERPINH1P50454 418 aaKnown RBP13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 TAS2R38P59533 333 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 GNA12Q03113 381 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 SYCP1Q15431 976 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 SHBQ15464 509 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 CCDC14Q49A88 953 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 APTXQ7Z2E3 356 aaKnown RBP13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 TFAP2DQ7Z6R9 452 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 GALNT15Q8N3T1 639 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 PCDH20Q8N6Y1 951 aaKnown RBP13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 EMC1Q8N766 993 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms