RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 OR7D4Q8NG98 312 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 OXNAD1Q96HP4 312 aaPredicted RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 ADAM7Q9H2U9 754 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 DERAQ9Y315 318 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 ARAP2Q8WZ64 1704 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 COL4A5P29400 1685 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 PRKCGP05129 697 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 MPP1Q00013 466 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 DSC2Q02487 901 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 GHRHRQ02643 423 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
SYNM-201ENST00000328642 TRIP10Q15642 601 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 FAM187BQ17R55 369 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 SLC44A1Q8WWI5 657 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 MRPS31Q92665 395 aaKnown RBP16.29■□□□□ 0.2
SYNM-201ENST00000328642 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 NDE1Q9NXR1 346 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 FAM95CA0A1B0GW59 222 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 PTGESO14684 152 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
SYNM-201ENST00000328642 EPHA3P29320 983 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 IMPG1Q17R60 797 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 TUBGCP3Q96CW5 907 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 VCXQ9H320 206 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 ALG9Q9H6U8 611 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 WDR55Q9H6Y2 383 aaPredicted RBP16.29■□□□□ 0.2
SYNM-201ENST00000328642 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 SNX15Q9NRS6 342 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 PKP3Q9Y446 797 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 CLUHO75153 1309 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 KATNA1O75449 491 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 C2P06681 752 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 CCDC166P0CW27 439 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 ACRP10323 421 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 NMBRP28336 390 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 NNMTP40261 264 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 PTPN9P43378 593 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
SYNM-201ENST00000328642 RHBDF2Q6PJF5 856 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 CRYBG2Q8N1P7 616 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 CASP10Q92851 521 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 EPS15L1Q9UBC2 864 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 PTCH2Q9Y6C5 1203 aa16.29■□□□□ 0.2
SYNM-201ENST00000328642 GLP2RO95838 553 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CYBBP04839 570 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
SYNM-201ENST00000328642 FUT11Q495W5 492 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CRLS1Q9UJA2 301 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 HACD1B0YJ81 288 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TRIM13O60858 407 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 EDF1O60869 148 aaKnown RBP16.28■□□□□ 0.2
SYNM-201ENST00000328642 ASMTLO95671 621 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 ABHD2P08910 425 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 GJA1P17302 382 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 HDCP19113 662 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 ARHGAP17Q68EM7 881 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TEKT4Q8WW24 435 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TBC1D10AQ9BXI6 508 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 LAMB1P07942 1786 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 PSMD3O43242 534 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 PROCP04070 461 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 PTPN3P26045 913 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 IVDP26440 423 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 COPAP53621 1224 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 MRNIPQ6NTE8 343 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 ARHGAP18Q8N392 663 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 ANLNQ9NQW6 1124 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 TRHDEQ9UKU6 1024 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 FZD10Q9ULW2 581 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
SYNM-201ENST00000328642 NUMA1Q14980 2115 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.2
SYNM-201ENST00000328642 PKNOX1P55347 436 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 POLE2P56282 527 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
SYNM-201ENST00000328642 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 RBM23Q86U06 439 aaKnown RBP16.28■□□□□ 0.2
SYNM-201ENST00000328642 CCNJLQ8IV13 435 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CALML6Q8TD86 181 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CLPTM1LQ96KA5 538 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 NMUR2Q9GZQ4 415 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 CDYLQ9Y232 598 aa16.28■□□□□ 0.2
SYNM-201ENST00000328642 EFR3BQ9Y2G0 817 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms