RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PCDH18Q9HCL0 1135 aa11.58□□□□□ -0.55
COL4A5-201ENST00000328300 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.55
COL4A5-201ENST00000328300 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.55
COL4A5-201ENST00000328300 EPHB6O15197 1021 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CCL23P55773 120 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 DGKZQ13574 1117 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SGO1Q5FBB7 561 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 BRI3BPQ8WY22 251 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 KCNK1O00180 336 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 TREHO43280 583 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 TBL1XO60907 577 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 PFKMP08237 780 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ADRA1BP35368 520 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ATP6V1E1P36543 226 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CHRNB3Q05901 458 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 PSRC1Q6PGN9 363 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 TMCO5AQ8N6Q1 288 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 C12orf50Q8NA57 414 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 EBNA1BP2Q99848 306 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ZNF711Q9Y462 761 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 BCLAF3A2AJT9 711 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CXCL14O95715 111 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ERCC2P18074 760 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 VHLP40337 213 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SMAD3P84022 425 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SLC20A2Q08357 652 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SERAC1Q96JX3 654 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ACSS3Q9H6R3 686 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ITM2BQ9Y287 266 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CRYL1Q9Y2S2 319 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 NFKB1P19838 968 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 PSMA3P25788 255 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 PSMB4P28070 264 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CDK18Q07002 472 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 NFYCQ13952 458 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 CENPLQ8N0S6 344 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 PRELID2Q8N945 189 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SQORQ9Y6N5 450 aa11.58□□□□□ -0.56
COL4A5-201ENST00000328300 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
COL4A5-201ENST00000328300 ALOX15BO15296 676 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 NFATC1O95644 943 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 MLYCDO95822 493 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ANXA5P08758 320 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CORO1CQ9ULV4 474 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 WNT7AO00755 349 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CCNCP24863 283 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 PPP2R1BP30154 601 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 NEK2P51955 445 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SEMA4DQ92854 862 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 NKD2Q969F2 451 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 MRPL48Q96GC5 212 aaKnown RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 TMEM237Q96Q45 408 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 THUMPD3Q9BV44 507 aaKnown RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 DTNAQ9Y4J8 743 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 INHAP05111 366 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 BGNP21810 368 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 RRM2P31350 389 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CHI3L1P36222 383 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SERPINB5P36952 375 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 TRMT11Q7Z4G4 463 aaKnown RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 OR8D1Q8WZ84 308 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 PPP1R36Q96LQ0 422 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SLC25A23Q9BV35 468 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SRRDQ9UH36 339 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CDV3Q9UKY7 258 aaKnown RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 AGO1Q9UL18 857 aaKnown RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SKAP2O75563 359 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 KELP23276 732 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 L1CAMP32004 1257 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SEC24CP53992 1094 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 CDCA2Q69YH5 1023 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SLC30A9Q6PML9 568 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 TCP10LQ8TDR4 215 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 DPY30Q9C005 99 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 PRDM12Q9H4Q4 367 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 SYNDIG1Q9H7V2 258 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 PARVBQ9HBI1 364 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ARHGEF9O43307 516 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 NDST2P52849 883 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 FSTL1Q12841 308 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
COL4A5-201ENST00000328300 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-201ENST00000328300 ADAMTSL2Q86TH1 951 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms