RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DDI1Q8WTU0 396 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 OSCP1Q8WVF1 389 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 FGF14Q92915 247 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 ZFYVE19Q96K21 471 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 FRMD8Q9BZ67 464 aaPredicted RBP19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 DUS2Q9NX74 493 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 PLK2Q9NYY3 685 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 E7ESA3 106 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 SLC9A3R1O14745 358 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 RASGRF2O14827 1237 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 CLDN11O75508 207 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 MAGEA6P43360 314 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 KCNJ11Q14654 390 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 PDK1Q15118 436 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 MPPE1Q53F39 396 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 ANKRD22Q5VYY1 191 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 AFMIDQ63HM1 303 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 HEATR6Q6AI08 1181 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 UMODL1-AS1Q8N2C9 162 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 KIAA1958Q8N8K9 716 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 TLCD1Q96CP7 247 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 OTUB2Q96DC9 234 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 SERPINB12Q96P63 405 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 FERMT1Q9BQL6 677 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 STMN4Q9H169 189 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 BCCIPQ9P287 314 aaKnown RBP eCLIP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 EPS15L1Q9UBC2 864 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 NUP205Q92621 2012 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 KIF26AQ9ULI4 1882 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 PPP1R12AO14974 1030 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 HOXD9P28356 352 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 OR1E1P30953 314 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 IFNAR2P48551 515 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 MAPKAPK2P49137 400 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 NRLP54845 237 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 STAT4Q14765 748 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 EML3Q32P44 896 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 LY6G5CQ5SRR4 150 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 FYB2Q5VWT5 728 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 ADGRG2Q8IZP9 1017 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 LZTR1Q8N653 840 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 OR52K2Q8NGK3 314 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 UHMK1Q8TAS1 419 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 IRF7Q92985 503 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 ELSPBP1Q96BH3 223 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 C9orf72Q96LT7 481 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 CCDC77Q9BR77 488 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 RPP25Q9BUL9 199 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 SLC39A8Q9C0K1 460 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 LRRC4CQ9HCJ2 640 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 SPHK2Q9NRA0 654 aa19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 NOVA2Q9UNW9 492 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-201ENST00000327304 MYOFQ9NZM1 2061 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 TYW5A2RUC4 315 aaKnown RBP19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 DFFAO00273 331 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 NCAM2O15394 837 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 TMEM63AO94886 807 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 AGTP01019 485 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 IVLP07476 585 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 ARSAP15289 507 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 GALNT2Q10471 571 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 PDIA2Q13087 525 aaKnown RBP19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 ZNF177Q13360 481 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 GRM2Q14416 872 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 PRKD1Q15139 912 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 MFSD6LQ8IWD5 586 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 PDIK1LQ8N165 341 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 CARNMT1Q8N4J0 409 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 WFDC5Q8TCV5 224 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 HTR3CQ8WXA8 447 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 E2F7Q96AV8 911 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 LGMNQ99538 433 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 RAB6BQ9NRW1 208 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 CLEC4EQ9ULY5 219 aa19.15■□□□□ 0.66
EXOSC3-201ENST00000327304 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 TCRBV7S3A2A0A539 114 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 C2CD4DB7Z1M9 353 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 RGS16O15492 202 aaPredicted RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 LUC7L3O95232 432 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 CYBBP04839 570 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 CYP17A1P05093 508 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 TSHRP16473 764 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 NDST2P52849 883 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 FCHO2Q0JRZ9 810 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 TNFAIP8L3Q5GJ75 292 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 RNF43Q68DV7 783 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 CXorf57Q6NSI4 855 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 ARHGAP36Q6ZRI8 547 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 EPS8L3Q8TE67 593 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 DEPDC1BQ8WUY9 529 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 HMCESQ96FZ2 354 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 BRD8Q9H0E9 1235 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 RETREG1Q9H6L5 497 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 TLDC2A0PJX2 215 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 RASA4BC9J798 803 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 NEDD8-MDP1E9PL57 170 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 GOLGA8MH3BSY2 632 aa19.14■□□□□ 0.65
EXOSC3-201ENST00000327304 RASA4O43374 803 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms