RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ACE2Q9BYF1 805 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CDH22Q9UJ99 828 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 TTC3P53804 2025 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 NCAM2O15394 837 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 COX4I1P13073 169 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 BRCC3P46736 316 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 LHX1P48742 406 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
COL9A1-201ENST00000320755 DBN1Q16643 649 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 TIGD5Q53EQ6 642 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 ANKRD23Q86SG2 305 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 SLC41A1Q8IVJ1 513 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 CCNYL1Q8N7R7 359 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 SREK1Q8WXA9 508 aaKnown RBP17.72■□□□□ 0.43
COL9A1-201ENST00000320755 MYLPFQ96A32 169 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 NUF2Q9BZD4 464 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 PRDM16Q9HAZ2 1276 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 SMIM24O75264 130 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 PMPCBO75439 489 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 B3GAT3O94766 335 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 MOCS2O96007 188 aaPredicted RBP17.72■□□□□ 0.43
COL9A1-201ENST00000320755 ITGAXP20702 1163 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 ATXN3P54252 364 aaPredicted RBP17.72■□□□□ 0.43
COL9A1-201ENST00000320755 DSG1Q02413 1049 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 PRPSAP1Q14558 356 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 TSNARE1Q96NA8 513 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 IL22Q9GZX6 179 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 ILKAPQ9H0C8 392 aaPredicted RBP17.72■□□□□ 0.43
COL9A1-201ENST00000320755 S100A14Q9HCY8 104 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 TCF7L2Q9NQB0 619 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 ADAM28Q9UKQ2 775 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 FIS1Q9Y3D6 152 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 RALGAPA2Q2PPJ7 1873 aa17.72■□□□□ 0.43
COL9A1-201ENST00000320755 TIMM44O43615 452 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 MPOP05164 745 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 ATP5BP06576 529 aaKnown RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 ZNF865P0CJ78 1059 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 GRIA4P48058 902 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 CDK7P50613 346 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 MPP1Q00013 466 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 GALNT2Q10471 571 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 CDH17Q12864 832 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 KLF10Q13118 480 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 PPM1LQ5SGD2 360 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 PHC3Q8NDX5 983 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 HDAC11Q96DB2 347 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 STN1Q9H668 368 aaKnown RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 TRHDEQ9UKU6 1024 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 INPP5FQ9Y2H2 1132 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 BPTFQ12830 3046 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 MSI1O43347 362 aaKnown RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 PIGNO95427 931 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 NPY2RP49146 381 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 CMPK2Q5EBM0 449 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 ARL13AQ5H913 290 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 TMEM198Q66K66 360 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 NAIF1Q69YI7 327 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-201ENST00000320755 EPGNQ6UW88 154 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 TMEM209Q96SK2 561 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 ECSITQ9BQ95 431 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 SFMBT1Q9UHJ3 866 aa17.71■□□□□ 0.43
COL9A1-201ENST00000320755 ARL5CA6NH57 179 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 CFLARO15519 480 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 AHSGP02765 367 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 CPT1AP50416 773 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SCAPQ12770 1279 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 RNF148Q8N7C7 305 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SMARCD1Q96GM5 515 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SLC2A6Q9UGQ3 507 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 M0QZ92 97 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 PSEN1P49768 467 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 NUDT2P50583 147 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 CDC16Q13042 620 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 CCNIQ14094 377 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SEPT6Q14141 434 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
COL9A1-201ENST00000320755 FSCBQ5H9T9 825 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 NAPEPLDQ6IQ20 393 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 ESRP1Q6NXG1 681 aaKnown RBP17.7■□□□□ 0.42
COL9A1-201ENST00000320755 RNF111Q6ZNA4 994 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 PIDD1Q9HB75 910 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 POMPQ9Y244 141 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 MYADML2A6NDP7 307 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 MTSS1O43312 755 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 F9P00740 461 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 GABRB3P28472 473 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 CXCR3P49682 368 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 MAP2K5Q13163 448 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 PDCD2Q16342 344 aaPredicted RBP17.7■□□□□ 0.42
COL9A1-201ENST00000320755 ZC3HC1Q86WB0 502 aaKnown RBP17.7■□□□□ 0.42
COL9A1-201ENST00000320755 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 DQX1Q8TE96 717 aaKnown RBP17.7■□□□□ 0.42
COL9A1-201ENST00000320755 FICDQ9BVA6 458 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 FAM96AQ9H5X1 160 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 SLC38A7Q9NVC3 462 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 TMLHEQ9NVH6 421 aa17.7■□□□□ 0.42
COL9A1-201ENST00000320755 OXSMQ9NWU1 459 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 285.1 ms