RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PROSCO94903 275 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 OR1E1P30953 314 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TMEM62Q0P6H9 643 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 C5orf22Q49AR2 442 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 RFTN2Q52LD8 501 aaPredicted RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 IL27RAQ6UWB1 636 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 IRX2Q9BZI1 471 aaPredicted RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 PCDHGB3Q9Y5G1 929 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 METTL21EPA6NDL7 271 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 C2CD2LO14523 706 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CYP11B2P19099 503 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 DCUN1D5Q9BTE7 237 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CLUHO75153 1309 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CBX4O00257 560 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CDC40O60508 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 GCATO75600 419 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 KRT33AO76009 404 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 UGT2B15P54855 530 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ARF5P84085 180 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ADAM28Q9UKQ2 775 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CREMQ03060 361 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ARMC8Q8IUR7 673 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TEFMQ96QE5 360 aaKnown RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 RPL26L1Q9UNX3 145 aaKnown RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF609O15014 1411 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TRIM40Q6P9F5 258 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ARCQ7LC44 396 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 OAFQ86UD1 273 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 DCLK3Q9C098 648 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CCDC167Q9P0B6 97 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TMCC2O75069 709 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 COX7A2P14406 83 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 CDH3P22223 829 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 TCF7P36402 384 aaPredicted RBP15.69■□□□□ 0.1
HCFC1-201ENST00000310441 SCNN1BP51168 640 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 EFEMP1Q12805 493 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 MYBPC3Q14896 1274 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 PCBP1Q15365 356 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 26.7
HCFC1-201ENST00000310441 SWI5Q1ZZU3 235 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 SLC45A4Q5BKX6 768 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 HGH1Q9BTY7 390 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 GGA2Q9UJY4 613 aa15.69■□□□□ 0.1
HCFC1-201ENST00000310441 ACOX1Q15067 660 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 SPOCD1Q6ZMY3 1216 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ITCHQ96J02 903 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 TARS2Q9BW92 718 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 MRASO14807 208 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 XYLBO75191 536 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 TGFB3P10600 412 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 TTPAP49638 278 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RPL14P50914 215 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 NAIF1Q69YI7 327 aaPredicted RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 SEPT12Q8IYM1 358 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 STAG3L4Q8TBR4 150 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RIT1Q92963 219 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 PIF1Q9H611 641 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 MYH14Q7Z406 1995 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 CHADO15335 359 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 CHKBQ9Y259 395 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RIPK2O43353 540 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 LSM12Q3MHD2 195 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 CTXN3Q4LDR2 81 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 DAW1Q8N136 415 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 CNTNAP5Q8WYK1 1306 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 NELL1Q92832 810 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RERGQ96A58 199 aaPredicted RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ZDHHC15Q96MV8 337 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 PLGRKTQ9HBL7 147 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 EIF2S3P41091 472 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ACSM2AQ08AH3 577 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ACSM2BQ68CK6 577 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ELOVL4Q9GZR5 314 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 IDO1P14902 403 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ALDH3A2P51648 485 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 RIPK1Q13546 671 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 MIB1Q86YT6 1006 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ZCCHC9Q8N567 271 aaKnown RBP15.68■□□□□ 0.1
HCFC1-201ENST00000310441 HACL1Q9UJ83 578 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 PPP1R3GB7ZBB8 358 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 SNAPC5O75971 98 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 DHFRP00374 187 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 CYP2C18P33260 490 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 SFRP1Q8N474 314 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ZHX1-C8orf76Q96EF9 292 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 PHF21BQ96EK2 531 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 FUT8Q9BYC5 575 aa15.68■□□□□ 0.1
HCFC1-201ENST00000310441 ABCC3O15438 1527 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ANKDD1BA6NHY2 528 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 DLG4P78352 724 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 TTLL2Q9BWV7 592 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 DGCR6LQ9BY27 220 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms