RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PCDHA2Q9Y5H9 948 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 A0A0A6YYK5 440 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 DCXO43602 365 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MBL2P11226 248 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 EPB42P16452 691 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 S100A1P23297 94 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 IL12AP29459 219 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 CYP2C18P33260 490 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 OXCT1P55809 520 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 TWF1Q12792 350 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GRIK3Q13003 919 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 HIST2H2ACQ16777 129 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 SLC5A9Q2M3M2 681 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 HIST2H2AA3Q6FI13 130 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 TATDN2Q93075 761 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 PRRG3Q9BZD7 231 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GPR63Q9BZJ6 419 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 LRRC40Q9H9A6 602 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 IL23AQ9NPF7 189 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ASAH2Q9NR71 780 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 KIAA1257Q9ULG3 409 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 NDUFAF1Q9Y375 327 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 PLIN4Q96Q06 1357 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 TTLL13PA6NNM8 815 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MYL12BO14950 172 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ENTPD5O75356 428 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 UNC5CO95185 931 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 IFNA14P01570 189 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 FYNP06241 537 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 TSPAN19P0C672 248 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GLUD2P49448 558 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GALK1P51570 392 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 LSM3P62310 102 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 CSHL1Q14406 222 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GSTA3Q16772 222 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 CASP12Q6UXS9 341 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ZNF605Q86T29 641 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 UNKQ9C0B0 810 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 LRMDAQ9H2I8 198 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 NINJ2Q9NZG7 142 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 LIN7AO14910 233 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 MPOP05164 745 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 COL6A1P12109 1028 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 RPL9P32969 192 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 ZNF846Q147U1 533 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 QPRTQ15274 297 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 CCNG2Q16589 344 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 GPR107Q5VW38 600 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MRPL48Q96GC5 212 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 UGT2B28Q9BY64 529 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 SLC7A5P2Q9GIP4 190 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MUC3BQ9H195 1237 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ZNF214Q9UL59 606 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 FAM220BPB1ANY3 271 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 AGRPO00253 132 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 EPS8Q12929 822 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 GLRA4Q5JXX5 417 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SPOCD1Q6ZMY3 1216 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZBTB46Q86UZ6 589 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS41-202ENST00000310301 CENPIQ92674 756 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 SEMA4DQ92854 862 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SHDQ96IW2 340 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TPD52L3Q96J77 140 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TBC1D10AQ9BXI6 508 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CAPN10Q9HC96 672 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ACOT9Q9Y305 439 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZW10O43264 779 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ATP5BP06576 529 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 RBP1P09455 135 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ACRP10323 421 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ACADMP11310 421 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CKBP12277 381 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 WARSP23381 471 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 CCNHP51946 323 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 STX4Q12846 297 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 PRKAA1Q13131 559 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TOP3AQ13472 1001 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 BROXQ5VW32 411 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 PDE12Q6L8Q7 609 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 CEP68Q76N32 757 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZNF571Q7Z3V5 609 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZDHHC13Q8IUH4 622 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 S100ZQ8WXG8 99 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 DLG3Q92796 817 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FAM136AQ96C01 138 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 KLHL32Q96NJ5 620 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ATXN3LQ9H3M9 355 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 PTPRHQ9HD43 1115 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SNX8Q9Y5X2 465 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 THSD7AQ9UPZ6 1657 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms