RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 WSB2Q9NYS7 404 aaPredicted RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 DNAI1Q9UI46 699 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 MBD1Q9UIS9 605 aaPredicted RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 RAB23Q9ULC3 237 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 HPCAL4Q9UM19 191 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 LAMA1P25391 3075 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 RASA4BC9J798 803 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 RASA4O43374 803 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 RNASEH1O60930 286 aaKnown RBP18.19■□□□□ 0.5
CCS-201ENST00000310190 EPN2O95208 641 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 ADH1BP00325 375 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 ACVRL1P37023 503 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 DPP6P42658 865 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 MRE11P49959 708 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 TPMTP51580 245 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 SRSF5Q13243 272 aaKnown RBP18.19■□□□□ 0.5
CCS-201ENST00000310190 KCNT1Q5JUK3 1230 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 DAB2IPQ5VWQ8 1189 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 KBTBD6Q86V97 674 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 ARHGAP12Q8IWW6 846 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 FAM160A2Q8N612 972 aaPredicted RBP18.19■□□□□ 0.5
CCS-201ENST00000310190 GPR161Q8N6U8 529 aaKnown RBP18.19■□□□□ 0.5
CCS-201ENST00000310190 CADM4Q8NFZ8 388 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 RUBCNQ92622 972 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 ZNF670Q9BS34 389 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCS-201ENST00000310190 PPM1HQ9ULR3 514 aa18.19■□□□□ 0.5
CCS-201ENST00000310190 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 CBX4O00257 560 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
CCS-201ENST00000310190 HOXD12P35452 270 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 TAS2R40P59535 323 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 ELF2Q15723 593 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 PPP6R3Q5H9R7 873 aaPredicted RBP18.18■□□□□ 0.5
CCS-201ENST00000310190 PEAR1Q5VY43 1037 aaPredicted RBP18.18■□□□□ 0.5
CCS-201ENST00000310190 IL31Q6EBC2 164 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 C11orf63Q6NUN7 778 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 CEP68Q76N32 757 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 DSG4Q86SJ6 1040 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 MAP7D3Q8IWC1 876 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 PGBD3Q8N328 593 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 TXLNBQ8N3L3 684 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 ZNF366Q8N895 744 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 ATP11CQ8NB49 1132 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 TMIEQ8NEW7 156 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 OR2A12Q8NGT7 310 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 OR8D1Q8WZ84 308 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 ZNF419Q96HQ0 510 aaPredicted RBP18.18■□□□□ 0.5
CCS-201ENST00000310190 CCDC114Q96M63 670 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 PABPC3Q9H361 631 aaKnown RBP18.18■□□□□ 0.5
CCS-201ENST00000310190 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 FZD4Q9ULV1 537 aa18.18■□□□□ 0.5
CCS-201ENST00000310190 PI4KAP42356 2102 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 RALGAPA1Q6GYQ0 2036 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 ARHGAP42A6NI28 874 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
CCS-201ENST00000310190 FOXD2O60548 495 aaPredicted RBP18.17■□□□□ 0.5
CCS-201ENST00000310190 GFRA3O60609 400 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 PRAMEF11O60813 436 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 C5AR1P21730 350 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 GLDCP23378 1020 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 CD6P30203 668 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 VAV2P52735 878 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 DPYSL3Q14195 570 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 MESDQ14696 234 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 CST6Q15828 149 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 SMTNL2Q2TAL5 461 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
CCS-201ENST00000310190 PLA2G2CQ5R387 149 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 TMCO4Q5TGY1 634 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 C22orf39Q6P5X5 142 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 CCDC112Q8NEF3 446 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 FATE1Q969F0 183 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 HMCESQ96FZ2 354 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 LRIG1Q96JA1 1093 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 SPON2Q9BUD6 331 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 GRPEL1Q9HAV7 217 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 TPX2Q9ULW0 747 aaKnown RBP18.17■□□□□ 0.5
CCS-201ENST00000310190 DMXL1Q9Y485 3027 aa18.17■□□□□ 0.5
CCS-201ENST00000310190 RCCD1A6NED2 376 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 SLC7A4O43246 635 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 DAPK3O43293 454 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 GSRP00390 522 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 DNTTP04053 509 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 ACADMP11310 421 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 BCKDHBP21953 392 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 TGM1P22735 817 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 SERPINB6P35237 376 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 CDH6P55285 790 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 PAFAH1B3Q15102 231 aaKnown RBP18.16■□□□□ 0.5
CCS-201ENST00000310190 TAZQ16635 292 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 FAM46CQ5VWP2 391 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 LPCAT2Q7L5N7 544 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 STK40Q8N2I9 435 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 HSPH1Q92598 858 aa18.16■□□□□ 0.5
CCS-201ENST00000310190 FOXJ1Q92949 421 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms