RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ARID5AQ03989 594 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 ENPEPQ07075 957 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 DSC1Q08554 894 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CETN1Q12798 172 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 IFT88Q13099 833 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MAPK7Q13164 816 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RIPK1Q13546 671 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 HTR4Q13639 388 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CYP1B1Q16678 543 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 KRT71Q3SY84 523 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PREPLQ4J6C6 727 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 ODF2Q5BJF6 829 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TNFAIP8L3Q5GJ75 292 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 WLSQ5T9L3 541 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RNF187Q5TA31 235 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 C15orf39Q6ZRI6 1047 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TRMT10CQ7L0Y3 403 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PIGWQ7Z7B1 504 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CPLX4Q7Z7G2 160 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RHPN2Q8IUC4 686 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 C12orf56Q8IXR9 622 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 COLGALT2Q8IYK4 626 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 FAM186BQ8IYM0 893 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 UBL4BQ8N7F7 174 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC197Q8NCU1 140 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GSTCDQ8NEC7 633 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CMASQ8NFW8 434 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SLC35G2Q8TBE7 412 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 UBLCP1Q8WVY7 318 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MAIP1Q8WWC4 291 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CCT6BQ92526 530 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RAPGEF5Q92565 580 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SLCO2A1Q92959 643 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SGSM3Q96HU1 749 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SEC16BQ96JE7 1060 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC114Q96M63 670 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 XPO6Q96QU8 1125 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RIT2Q99578 217 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 HSD17B14Q9BPX1 270 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GORASP1Q9BQQ3 440 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RTP3Q9BQQ7 232 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 EIF2AQ9BY44 585 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 FGFBP2Q9BYJ0 223 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GCOM2Q9BZD3 368 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 NSRP1Q9H0G5 558 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 DDX47Q9H0S4 455 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CXCL16Q9H2A7 254 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 WDR26Q9H7D7 661 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TBC1D17Q9HA65 648 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PARVGQ9HBI0 331 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CHST12Q9NRB3 414 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 NRBP2Q9NSY0 501 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 DLL3Q9NYJ7 618 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TBC1D7Q9P0N9 293 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GCNT4Q9P109 453 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 IGSF9Q9P2J2 1179 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 EPS15L1Q9UBC2 864 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CACNG4Q9UBN1 327 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GULP1Q9UBP9 304 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 WNT16Q9UBV4 365 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MTRF1LQ9UGC7 380 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 AMACRQ9UHK6 382 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PACSIN2Q9UNF0 486 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 FRMD4BQ9Y2L6 1034 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PCDHB2Q9Y5E7 798 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CLUHO75153 1309 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 ITPR1Q14643 2758 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MYO16Q9Y6X6 1858 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PI4KAP42356 2102 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 NPHP3-ACAD11A0A0J9YXS1 232 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 A0A1B0GUA9 196 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 CCT8L1PA6NM43 557 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 INPPL1O15357 1258 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 TTI1O43156 1089 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 TGFB1I1O43294 461 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 KIF1CO43896 1103 aaKnown RBP5.1□□□□□ -1.59
CKS1B-201ENST00000308987 MGRN1O60291 552 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 GAS7O60861 476 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 RTN2O75298 545 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 TCEA3O75764 348 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 POMCP01189 267 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 FGGP02679 453 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 SOD2P04179 222 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 IMPDH2P12268 514 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 RARGP13631 454 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 RPL17P18621 184 aaKnown RBP5.1□□□□□ -1.59
CKS1B-201ENST00000308987 TNFAIP3P21580 790 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 CTNNA2P26232 953 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 ATP5DP30049 168 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 HPDP32754 393 aaPredicted RBP5.1□□□□□ -1.59
CKS1B-201ENST00000308987 MAN1A1P33908 653 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 THBS2P35442 1172 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 CASP5P51878 434 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 SEC24CP53992 1094 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 PMS2P54278 862 aa5.1□□□□□ -1.59
CKS1B-201ENST00000308987 MAGOHP61326 146 aaKnown RBP5.1□□□□□ -1.59
CKS1B-201ENST00000308987 NTHL1P78549 312 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms