RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PFKLP17858 780 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 NFKB1P19838 968 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TPSB2P20231 275 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 OR1E1P30953 314 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 FDFT1P37268 417 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 GRIA1P42261 906 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 MAGEA4P43358 317 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 GYS2P54840 703 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 CDH4P55283 916 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 IFI35P80217 286 aaPredicted RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 PDIA2Q13087 525 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 SLC29A2Q14542 456 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TPSAB1Q15661 275 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 HIF1AQ16665 826 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 KYNUQ16719 465 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 RABGAP1LQ5R372 815 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 HTR3DQ70Z44 454 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TRMT10CQ7L0Y3 403 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 ASCL5Q7RTU5 278 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 BBS7Q8IWZ6 715 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 CMTM8Q8IZV2 173 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 KRT222Q8N1A0 295 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TTC16Q8NEE8 873 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 UHMK1Q8TAS1 419 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 EXOC4Q96A65 974 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 C9orf72Q96LT7 481 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TEKT5Q96M29 485 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 AGAP3Q96P47 875 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 SERPINB12Q96P63 405 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 GAS2L1Q99501 681 aaPredicted RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 IL12RB2Q99665 862 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 SH3GL2Q99962 352 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 TSPYL1Q9H0U9 437 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 GBA3Q9H227 469 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 FAM186AA6NE01 2351 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 A0A0D9SEW6 157 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARHGAP42A6NI28 874 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ALOX15BO15296 676 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF189O75820 626 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PAPLNO95428 1278 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ACSL3O95573 720 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 FGF19O95750 216 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TTC4O95801 387 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 NTRK1P04629 796 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 HLA-DQB2P05538 268 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 NUDT17P0C025 328 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CEBPBP17676 345 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 HOXD9P28356 352 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MAGEA3P43357 314 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARL4CP56559 192 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF844Q08AG5 666 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 OLIG2Q13516 323 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SERINC3Q13530 473 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 POLD3Q15054 466 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PARP6Q2NL67 630 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PARP15Q460N3 678 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 LRIG3Q6UXM1 1119 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CENPUQ71F23 418 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CHST9Q7L1S5 443 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 OTOP3Q7RTS5 596 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 LRRC49Q8IUZ0 686 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 IGDCC3Q8IVU1 814 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ZBED8Q8IZ13 594 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PDCD7Q8N8D1 485 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MCUQ8NE86 351 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 OR7D4Q8NG98 312 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SH3RF2Q8TEC5 729 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ING5Q8WYH8 240 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MAML1Q92585 1016 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARHGEF2Q92974 986 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 USP13Q92995 863 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 VAT1Q99536 393 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 FERMT1Q9BQL6 677 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MLPHQ9BV36 600 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PHACTR1Q9C0D0 580 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TASP1Q9H6P5 420 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 RSPH14Q9UHP6 348 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARHGAP26Q9UNA1 814 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 A0A1B0GVM2 712 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TCAF2A6NFQ2 919 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 EIF3HO15372 352 aaKnown RBP eCLIP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CACNG3O60359 315 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TBL1XO60907 577 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CLDN11O75508 207 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 GLP2RO95838 553 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 OAS2P29728 719 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 YBEYP58557 167 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 GNA12Q03113 381 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CBLBQ13191 982 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SPARCL1Q14515 664 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 BBS9Q3SYG4 887 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARHGAP15Q53QZ3 475 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DENND2CQ68D51 928 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms