RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 FAM187BQ17R55 369 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 DENND1BQ6P3S1 775 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 IKBIPQ70UQ0 350 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT74Q7RTS7 529 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 POLNQ7Z5Q5 900 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 HAS1Q92839 578 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF669Q96BR6 464 aaPredicted RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 MTMR8Q96EF0 704 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 QRFPRQ96P65 431 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ENTPD4Q9Y227 616 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CASP8AP2Q9UKL3 1982 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 IRAK2O43187 625 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 GYPCP04921 128 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP12AP54707 1039 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CAMK1Q14012 370 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 TBC1D25Q3MII6 688 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 NECTIN4Q96NY8 510 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 THTPAQ9BU02 230 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 KIFC1Q9BW19 673 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 IL22Q9GZX6 179 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 SNX6Q9UNH7 406 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 SHOC2Q9UQ13 582 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PITPNM1O00562 1244 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SERPINB8P50452 374 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 TUBP50607 506 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 NUP107P57740 925 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 MPPE1Q53F39 396 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 DAB2IPQ5VWQ8 1189 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 LPCAT2Q7L5N7 544 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 RD3Q7Z3Z2 195 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 BRI3BPQ8WY22 251 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 BBS4Q96RK4 519 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 GMLQ99445 158 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 KCNS3Q9BQ31 491 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ERP44Q9BS26 406 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 IGFLR1Q9H665 355 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PSME2Q9UL46 239 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ZDHHC9Q9Y397 364 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ARIH1Q9Y4X5 557 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PCDHGB3Q9Y5G1 929 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 STX11O75558 287 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 GCATO75600 419 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 TLX1P31314 330 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SCNN1BP51168 640 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ZACNQ401N2 412 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PRAMEF19Q5SWL8 479 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PALB2Q86YC2 1186 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PLD4Q96BZ4 506 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 BTN2A3PQ96KV6 586 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CORO1BQ9BR76 489 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ILKAPQ9H0C8 392 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 MLXIPLQ9NP71 852 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC177Q9NQR7 707 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 RGPD3A6NKT7 1758 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 RBM47A0AV96 593 aaKnown RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CBX4O00257 560 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 KATNA1O75449 491 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 BDNFP23560 247 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CCL23P55773 120 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 COX10Q12887 443 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PGS1Q32NB8 556 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 MIIPQ5JXC2 388 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CDKAL1Q5VV42 579 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ACTRT1Q8TDG2 376 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PCDH9Q9HC56 1237 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SOHLH2Q9NX45 425 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SH3GLB1Q9Y371 365 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ATG2BQ96BY7 2078 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 A0A0B4J269 797 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 AIM2O14862 343 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 TEX33O43247 280 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 DTNBO60941 627 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT6AP02538 564 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT6BP04259 564 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 AMD1P17707 334 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT6CP48668 564 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 HNRNPH2P55795 449 aaKnown RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 TMEM154Q6P9G4 183 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 LRIG3Q6UXM1 1119 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CDT1Q9H211 546 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 POLD4Q9HCU8 107 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP13A1Q9HD20 1204 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CLDN11O75508 207 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 WEE1P30291 646 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SCNN1GP51170 649 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ELP6Q0PNE2 266 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CYP20A1Q6UW02 462 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC81Q6ZN84 652 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 EPHX4Q8IUS5 362 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC22A17Q8WUG5 538 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SH3BP4Q9P0V3 963 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 TDRD15B5MCY1 1934 aaKnown RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ASLP04424 464 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 PTPN2P17706 415 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 GJA9P57773 515 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 XRCC4Q13426 336 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 FBXO42Q6P3S6 717 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms