RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 GABRB2P47870 512 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 STARD3Q14849 445 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 ALYREFQ86V81 257 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 KCTD4Q8WVF5 259 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 LENG9Q96B70 501 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 TSPAN18Q96SJ8 248 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 MECRQ9BV79 373 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 WDR41Q9HAD4 459 aa16.59■□□□□ 0.25
BRD3-201ENST00000303407 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
BRD3-201ENST00000303407 SNED1Q8TER0 1413 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 OR56A5P0C7T3 313 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 ERCC2P18074 760 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 BOP1Q14137 746 aaKnown RBP16.58■□□□□ 0.25
BRD3-201ENST00000303407 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.25
BRD3-201ENST00000303407 SLC25A52Q3SY17 297 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 TRIM60Q495X7 471 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 ABHD8Q96I13 439 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 TBC1D10AQ9BXI6 508 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 PDZD7Q9H5P4 517 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 COPS7BQ9H9Q2 264 aaPredicted RBP16.58■□□□□ 0.25
BRD3-201ENST00000303407 RNPEPL1Q9HAU8 725 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 RABGEF1Q9UJ41 708 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.25
BRD3-201ENST00000303407 EPB42P16452 691 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 HOXB8P17481 243 aaPredicted RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 ATP5C1P36542 298 aaKnown RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 NSMCE2Q96MF7 247 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 SEMA6AQ9H2E6 1030 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 ARHGEF9O43307 516 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 PEX10O60683 326 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 PFKFB4Q16877 469 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 DEPDC1Q5TB30 811 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 PPP4R4Q6NUP7 873 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 ARMC6Q6NXE6 501 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 APTXQ7Z2E3 356 aaKnown RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 SNX15Q9NRS6 342 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 BUD23O43709 281 aaKnown RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 COX4I1P13073 169 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 CD52P31358 61 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 ARL4DP49703 201 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 RAB10P61026 200 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 RUNX1T1Q06455 604 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 BTG3Q14201 252 aaPredicted RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 TRIM48Q8IWZ4 208 aa16.58■□□□□ 0.24
BRD3-201ENST00000303407 DDX28Q9NUL7 540 aaKnown RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 AJAP1Q9UKB5 411 aaPredicted RBP16.58■□□□□ 0.24
BRD3-201ENST00000303407 ZMPSTE24O75844 475 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 RRM2P31350 389 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 ICAM3P32942 547 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 GPC1P35052 558 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 CLCN5P51795 746 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 C10orf107Q8IVU9 208 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 TMCO5AQ8N6Q1 288 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 OSCP1Q8WVF1 389 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 KCTD15Q96SI1 283 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
BRD3-201ENST00000303407 PCDHGC3Q9UN70 934 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 KLRC2P26717 231 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 LRPAP1P30533 357 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 NAGLUP54802 743 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 SAMD4BQ5PRF9 694 aaKnown RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 ERAP2Q6P179 960 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 IL27RAQ6UWB1 636 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 PACS1Q6VY07 963 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 PCDH20Q8N6Y1 951 aaKnown RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 DNMT3LQ9UJW3 386 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 PLA2G4CQ9UP65 541 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 COL1A1P02452 1464 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 CDKN2BP42772 138 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 TERB1Q8NA31 727 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 SMIM35A0A1B0GVV1 85 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 USP2O75604 605 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 LYPLA1O75608 230 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 VCLP18206 1134 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 TRIM69Q86WT6 500 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 P2RY11Q96G91 374 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 ZNF184Q99676 751 aaPredicted RBP16.57■□□□□ 0.24
BRD3-201ENST00000303407 LNPEPQ9UIQ6 1025 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 ITM2BQ9Y287 266 aa16.57■□□□□ 0.24
BRD3-201ENST00000303407 CABYRO75952 493 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 IL2P60568 153 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 WASHC5Q12768 1159 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 NOMO2Q5JPE7 1267 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 SDHAF4Q5VUM1 108 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 C12orf50Q8NA57 414 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 MTMR14Q8NCE2 650 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 HIC2Q96JB3 615 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 GOLGA2P5Q9HBQ8 144 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PHLPP1O60346 1717 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 CNTNAP1P78357 1384 aa16.56■□□□□ 0.24
BRD3-201ENST00000303407 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
BRD3-201ENST00000303407 RGS14O43566 566 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms