RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 POLR2DO15514 142 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 SDC3O75056 442 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 STK19P49842 368 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 ZFP36L1Q07352 338 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 TBR1Q16650 682 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 FAM173BQ6P4H8 233 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 FOXR2Q6PJQ5 311 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF783Q6ZMS7 281 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 CCAR2Q8N163 923 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 CARNMT1Q8N4J0 409 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 ARRDC3Q96B67 414 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 C1QTNF2Q9BXJ5 285 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 SLC4A5Q9BY07 1137 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 EXOC1Q9NV70 894 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 HESX1Q9UBX0 185 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 PPFIA2O75334 1257 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF821O75541 412 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 GJB6O95452 261 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 IL1BP01584 269 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 VAV1P15498 845 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 NR2F2P24468 414 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 RPL13P26373 211 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 CASP1P29466 404 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 EIF2B5Q13144 721 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 FGL2Q14314 439 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 AGERQ15109 404 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 PERM1Q5SV97 790 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 GUSBP11Q6P575 273 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 TAC4Q86UU9 113 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 OR2A12Q8NGT7 310 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 IPO9Q96P70 1041 aaKnown RBP6.64□□□□□ -1.35
ITGB1-201ENST00000302278 NOX5Q96PH1 765 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 FEM1AQ9BSK4 669 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 RETREG1Q9H6L5 497 aa6.64□□□□□ -1.35
ITGB1-201ENST00000302278 A0A1W2PQU0 124 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 FAM47DPA6NHR8 397 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 LMO7DNF2Z398 122 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 AQP9O43315 295 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 GLI1P08151 1106 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 KRT13P13646 458 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 NNMTP40261 264 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ACADSBP45954 432 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 MXI1P50539 228 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 NR1D2Q14995 579 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 STK38Q15208 465 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 C3orf38Q5JPI3 329 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 RNF219Q5W0B1 726 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 EFL1Q7Z2Z2 1120 aaKnown RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 OR6C4Q8NGE1 309 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 TFAP2BQ92481 460 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 KLF15Q9UIH9 416 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SLC25A13Q9UJS0 675 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SPENQ96T58 3664 aaKnown RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 IGLV3-10A0A075B6K4 115 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 A0A1W2PQ27 194 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 A0A1W2PQ64 194 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 A0A1W2PQC6 194 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SRCP12931 536 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 RPIAP49247 311 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 YPEL5P62699 121 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 RPS21P63220 83 aaKnown RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 RABGAP1LQ5R372 815 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 MMS22LQ6ZRQ5 1243 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 Q6ZSR6 202 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ERN2Q76MJ5 926 aaKnown RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 TMC6Q7Z403 805 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 TMEM110Q86TL2 294 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF564Q8TBZ8 553 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 GLMNQ92990 594 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF212Q9UDV6 495 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 APPL1Q9UKG1 709 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 FADS3Q9Y5Q0 445 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 PMS2P1A4D2B8 440 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 PRNPP04156 253 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SLC2A3P11169 496 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 GPD2P43304 727 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 DPYDQ12882 1025 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ZNF177Q13360 481 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 BNIPLQ7Z465 357 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 LMO3Q8TAP4 145 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 CLEC4CQ8WTT0 213 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 RAB7BQ96AH8 199 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 CENPTQ96BT3 561 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 NAF1Q96HR8 494 aaKnown RBP6.63□□□□□ -1.35
ITGB1-201ENST00000302278 SLC12A9Q9BXP2 914 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 PCDHA7Q9UN72 937 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 PCDHGA4Q9Y5G9 962 aa6.63□□□□□ -1.35
ITGB1-201ENST00000302278 DRGXA6NNA5 263 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 D6RAR5 112 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 PLD2O14939 933 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 SPINT1O43278 529 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 TNFSF15O95150 251 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 SLC5A2P31639 672 aa6.62□□□□□ -1.35
ITGB1-201ENST00000302278 CHRNA3P32297 505 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms