RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 SKA1Q96BD8 255 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 AP5M1Q9H0R1 490 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
DDB1-201ENST00000301764 RNF19AQ9NV58 838 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 ZNF358Q9NW07 568 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 COQ6Q9Y2Z9 468 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 TRIM17Q9Y577 477 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 ZNF536O15090 1300 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 SNAP91O60641 907 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 TOMM70O94826 608 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 MT-ND1P03886 318 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 XRCC1P18887 633 aaPredicted RBP15.49■□□□□ 0.07
DDB1-201ENST00000301764 TAF6P49848 677 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 THOP1P52888 689 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 DPYSQ14117 519 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 SQLEQ14534 574 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 CARTPTQ16568 116 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 LSM12Q3MHD2 195 aaKnown RBP15.49■□□□□ 0.07
DDB1-201ENST00000301764 FRMD7Q6ZUT3 714 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 OFCC1Q8IZS5 231 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 C12orf29Q8N999 325 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 FNDC5Q8NAU1 212 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 ACTRT2Q8TDY3 377 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 EDEM1Q92611 657 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
DDB1-201ENST00000301764 CCDC154A6NI56 674 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 TRAFD1O14545 582 aaPredicted RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 T-ENOLP0DO92 83 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 ATP5F1P24539 256 aaPredicted RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 INAQ16352 499 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 GALNT18Q6P9A2 607 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 FBXO30Q8TB52 745 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 TRPC4APQ8TEL6 797 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 ZNF670Q9BS34 389 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 MTF2Q9Y483 593 aaPredicted RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 TNPO2O14787 897 aaKnown RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 LSM1O15116 133 aaKnown RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 H6PDO95479 791 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 AMHP03971 560 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 CKMT2P17540 419 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 ALG9Q9H6U8 611 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 PCDHGB4Q9UN71 923 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 MYOCOSA0A1B0GUC4 107 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 TYW5A2RUC4 315 aaKnown RBP15.48■□□□□ 0.07
DDB1-201ENST00000301764 NCAM2O15394 837 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 TSPAN3O60637 253 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 NFICP08651 508 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 GM2AP17900 193 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 CCT8P50990 548 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 POC5Q8NA72 575 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 PLEKHO2Q8TD55 490 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 ZNF556Q9HAH1 456 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 SLC17A6Q9P2U8 582 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 DGKBQ9Y6T7 804 aa15.48■□□□□ 0.07
DDB1-201ENST00000301764 ACKR2O00590 384 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 SYNCRIPO60506 623 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 SEC24AO95486 1093 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TOP3BO95985 862 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 AKT1P31749 480 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 GRIK1P39086 918 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 KRR1Q13601 381 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 NEPROQ6NW34 567 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TBCDQ9BTW9 1192 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 MORF4L1Q9UBU8 362 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 NRP2O60462 931 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ITGAXP20702 1163 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 MAGP20916 626 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TKTL1P51854 596 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 CDH13P55290 713 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ARMC4Q5T2S8 1044 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TMEM198Q66K66 360 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ZC3H3Q8IXZ2 948 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 DENND1AQ8TEH3 1009 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TFAP2BQ92481 460 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 IL22Q9GZX6 179 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 FAM32AQ9Y421 112 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 CCNE2O96020 404 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 LRRC74AQ0VAA2 488 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 MSLNQ13421 630 aaPredicted RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 SV2CQ496J9 727 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ANKRD23Q86SG2 305 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 VSIG10LQ86VR7 867 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 AHI1Q8N157 1196 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 PHTF2Q8N3S3 785 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ZNF276Q8N554 614 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 SNX31Q8N9S9 440 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 P2RY11Q96G91 374 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 RIBC2Q9H4K1 309 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 VPS45Q9NRW7 570 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 CRYL1Q9Y2S2 319 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 FAM20BO75063 409 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 MED26O95402 600 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ST13P50502 369 aaKnown RBP15.47■□□□□ 0.07
DDB1-201ENST00000301764 ITGA7Q13683 1181 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 INSCQ1MX18 579 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 ZRANB3Q5FWF4 1079 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 TTC23Q5W5X9 447 aa15.47■□□□□ 0.07
DDB1-201ENST00000301764 SPESP1Q6UW49 350 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms