RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GBP5Q96PP8 586 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 CAB39LQ9H9S4 337 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 STARD7Q9NQZ5 370 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 RRN3Q9NYV6 651 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 TAS2R1Q9NYW7 299 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 A0A1W2PQ45 241 aaPredicted RBP22.34■■□□□ 1.17
TPM4-201ENST00000300933 A0A1W2PQY0 241 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ALDH1A1P00352 501 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 GSTA2P09210 222 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 KCNA4P22459 653 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ARFIP2P53365 341 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 FAM26DQ5JW98 314 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ACVR1CQ8NER5 493 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 CERS2Q96G23 380 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 FAM193BQ96PV7 902 aaPredicted RBP22.34■■□□□ 1.17
TPM4-201ENST00000300933 TRIM55Q9BYV6 548 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 SLC39A8Q9C0K1 460 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 GBA3Q9H227 469 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ABCC13Q9NSE7 274 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 PCDH10Q9P2E7 1040 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 HMBSP08397 361 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 ITGA2BP08514 1039 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 ESRRAP11474 423 aaPredicted RBP22.33■■□□□ 1.17
TPM4-201ENST00000300933 MX2P20592 715 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 DLG2Q15700 870 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 CDKL2Q92772 493 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 TEKT5Q96M29 485 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 TMEM120AQ9BXJ8 343 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 BFARQ9NZS9 450 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 TXNDC16Q9P2K2 825 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 PCDHB8Q9UN66 801 aa22.33■■□□□ 1.17
TPM4-201ENST00000300933 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.33■■□□□ 1.17
TPM4-201ENST00000300933 MAGEA13PA6NCF6 341 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 IGLV3-25P01717 112 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 SERPINB6P35237 376 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 RPL10AP62906 217 aaKnown RBP22.33■■□□□ 1.16
TPM4-201ENST00000300933 MAPRE1Q15691 268 aaKnown RBP22.33■■□□□ 1.16
TPM4-201ENST00000300933 FAM171A1Q5VUB5 890 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 CHSY1Q86X52 802 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 MIB1Q86YT6 1006 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 ARHGAP12Q8IWW6 846 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 GPR62Q9BZJ7 368 aa22.33■■□□□ 1.16
TPM4-201ENST00000300933 SAT1P21673 171 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 CCR1P32246 355 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 DSC1Q08554 894 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 ZRSR2Q15696 482 aaKnown RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 VARS2Q5ST30 1063 aaKnown RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 N4BP2L1Q5TBK1 243 aaPredicted RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 KCTD11Q693B1 232 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 GATA6Q92908 595 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 E2F7Q96AV8 911 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 CAPNS2Q96L46 248 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 UROC1Q96N76 676 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 NCAM2O15394 837 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 HNRNPCL1O60812 293 aaKnown RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 MYL2P10916 166 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 NMBRP28336 390 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 CCNFP41002 786 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 SLC5A9Q2M3M2 681 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 MAP3K21Q5TCX8 1036 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 FAM43BQ6ZT52 329 aaPredicted RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 MARK2Q7KZI7 788 aaKnown RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 DBF4BQ8NFT6 615 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 IPMKQ8NFU5 416 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 TRAPPC9Q96Q05 1148 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 ZNF184Q99676 751 aaPredicted RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 GMIPQ9P107 970 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 STX18Q9P2W9 335 aaKnown RBP22.32■■□□□ 1.16
TPM4-201ENST00000300933 HS3ST4Q9Y661 456 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 NLRC5Q86WI3 1866 aa22.32■■□□□ 1.16
TPM4-201ENST00000300933 TTC24A2A3L6 582 aaPredicted RBP22.31■■□□□ 1.16
TPM4-201ENST00000300933 LYPLA1O75608 230 aaPredicted RBP22.31■■□□□ 1.16
TPM4-201ENST00000300933 DLDP09622 509 aaKnown RBP22.31■■□□□ 1.16
TPM4-201ENST00000300933 NOGQ13253 232 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 EIF4EBP2Q13542 120 aaPredicted RBP22.31■■□□□ 1.16
TPM4-201ENST00000300933 CUL3Q13618 768 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 SPDYAQ5MJ70 313 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 RASIP1Q5U651 963 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 LHX8Q68G74 356 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 STRA8Q7Z7C7 330 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ARID3BQ8IVW6 561 aaPredicted RBP22.31■■□□□ 1.16
TPM4-201ENST00000300933 MTBPQ96DY7 904 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 FAM161BQ96MY7 647 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ACSS2Q9NR19 701 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ARHGEF38Q9NXL2 777 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 EMCNQ9ULC0 261 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ZCWPW2A0A1B0GU75 182 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 INHAP05111 366 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 TYK2P29597 1187 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 EFEMP1Q12805 493 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 POU6F1Q14863 301 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ANKRD20A4Q4UJ75 823 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 ATPAF2Q8N5M1 289 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 PNPLA1Q8N8W4 532 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 PRDM16Q9HAZ2 1276 aa22.31■■□□□ 1.16
TPM4-201ENST00000300933 PTPRDP23468 1912 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 PMPCBO75439 489 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 TYMPP19971 482 aa22.3■■□□□ 1.16
TPM4-201ENST00000300933 GSTT1P30711 240 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms