RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SDC4P31431 198 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 SLC12A2P55011 1212 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 IRF9Q00978 393 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 FUT11Q495W5 492 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 JADE1Q6IE81 842 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 HEPHQ9BQS7 1158 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 KCNK1O00180 336 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 TRIM13O60858 407 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 CDK9P50750 372 aaKnown RBP15.12■□□□□ 0.01
SPIDR-201ENST00000297423 PSME3P61289 254 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 GBE1Q04446 702 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 PGS1Q32NB8 556 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 PBXIP1Q96AQ6 731 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 SEPHS2Q99611 448 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 CDH19Q9H159 772 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 CCDC68Q9H2F9 335 aa15.12■□□□□ 0.01
SPIDR-201ENST00000297423 NOL6Q9H6R4 1146 aaKnown RBP15.12■□□□□ 0.01
SPIDR-201ENST00000297423 BIRC5O15392 142 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 LTFP02788 710 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 HNRNPLP14866 589 aaKnown RBP eCLIP15.11■□□□□ 0.011e-8■■■■■ 28.9
SPIDR-201ENST00000297423 MTA1Q13330 715 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 DUOXA2Q1HG44 320 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MGAT5BQ3V5L5 792 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MAGEE2Q8TD90 523 aaPredicted RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 VPS50Q96JG6 964 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MAGEB5Q9BZ81 275 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 NAA50Q9GZZ1 169 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 PNPLA3Q9NST1 481 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 KCNH4Q9UQ05 1017 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 FUOMA2VDF0 154 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 TK2O00142 265 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 PARNO95453 639 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 CYP2C8P10632 490 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 TCF7P36402 384 aaPredicted RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 NUMBP49757 651 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 TAP1Q03518 808 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 LRRC38Q5VT99 294 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 PLD6Q8N2A8 252 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 BORCS5Q969J3 196 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 ISOC1Q96CN7 298 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 KLHL32Q96NJ5 620 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 RUVBL2Q9Y230 463 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MATN2O00339 956 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 C4BPAP04003 597 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 MAPTP10636 758 aaKnown RBP15.11■□□□□ 0.01
SPIDR-201ENST00000297423 ZBTB17Q13105 803 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 PCLAFQ15004 111 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 LGMNQ99538 433 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 DHRS4Q9BTZ2 278 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 EPS8L2Q9H6S3 715 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 INIPQ9NRY2 104 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 RNF19AQ9NV58 838 aa15.11■□□□□ 0.01
SPIDR-201ENST00000297423 C7orf72A4D263 438 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 HTR3EA5X5Y0 456 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 CHADO15335 359 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 MED7O43513 233 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 DENRO43583 198 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GPD1P21695 349 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 XKR3Q5GH77 459 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 MAVSQ7Z434 540 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 CAND1Q86VP6 1230 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 TRIM8Q9BZR9 551 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 MROH8Q9H579 483 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 SNX15Q9NRS6 342 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 HES2Q9Y543 173 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 LYPLA2O95372 231 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GNAO1P09471 354 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ACO1P21399 889 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 CD97P48960 835 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 RAD23AP54725 363 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 EMP3P54852 163 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 C12orf56Q8IXR9 622 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 HDAC11Q96DB2 347 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GATA5Q9BWX5 397 aaPredicted RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 TRDMT1O14717 391 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 NRP1O14786 923 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 TRUB2O95900 331 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ERBB2P04626 1255 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ARSAP15289 507 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 KCNA2P16389 499 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GRIA4P48058 902 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 SULT2A1Q06520 285 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 SPNS2Q8IVW8 549 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 BBS5Q8N3I7 341 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 COLGALT1Q8NBJ5 622 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ANKRD36BP1Q96IX9 119 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms