RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ATP6V1C1P21283 382 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ZNF276Q8N554 614 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ELMO1Q92556 727 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 POLR1BQ9H9Y6 1135 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 BCL10O95999 233 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 MACC1Q6ZN28 852 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 CAPSLQ8WWF8 208 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SNRNP25Q9BV90 132 aaKnown RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 UBXN6Q9BZV1 441 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 TMEM39AQ9NV64 488 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ARL15Q9NXU5 204 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 GRK4P32298 578 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 MMP13P45452 471 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 OTOP3Q7RTS5 596 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 HDDC2Q7Z4H3 204 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CLIP4Q8N3C7 705 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 AGBL3Q8NEM8 1001 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 EPB41L1Q9H4G0 881 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 OR12D3Q9UGF7 316 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 NPEPPSL1A6NEC2 478 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 ADAMTS3O15072 1205 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 MTFR1Q15390 333 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CYP4X1Q8N118 509 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 NSMCE2Q96MF7 247 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 WDR41Q9HAD4 459 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 LIASO43766 372 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CERCAMQ5T4B2 595 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 AZIN2Q96A70 460 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 BBS4Q96RK4 519 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CLIC5Q9NZA1 410 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 YDJCA8MPS7 323 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PTPRAP18433 802 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 RPL22P35268 128 aaKnown RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CASP7P55210 303 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CDH17Q12864 832 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 SNAP47Q5SQN1 464 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 JOSD2Q8TAC2 188 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PLEKHG4BQ96PX9 1271 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 SLC17A6Q9P2U8 582 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 TUBGCP4Q9UGJ1 667 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 JCADQ9P266 1359 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 AQP1P29972 269 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 IDH2P48735 452 aaKnown RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PPM1JQ5JR12 505 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 USP7Q93009 1102 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CORO1BQ9BR76 489 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 ACAT2Q9BWD1 397 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 STK39Q9UEW8 545 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PCDHB5Q9Y5E4 795 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 DGKBQ9Y6T7 804 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 LGALS2P05162 132 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 PTDSS1P48651 473 aaKnown RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 SRSF11Q05519 484 aaKnown RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 RRP1BQ14684 758 aaKnown RBP15.65■□□□□ 0.1
FNDC1-201ENST00000297267 BCAS3Q9H6U6 928 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 MAT2BQ9NZL9 334 aa15.65■□□□□ 0.1
FNDC1-201ENST00000297267 CD48P09326 243 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 ATP4AP20648 1035 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 RNF31Q96EP0 1072 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 SENP8Q96LD8 212 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 PCDHGA4Q9Y5G9 962 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 C9IYK1 514 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 GJA9P57773 515 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 SEMA3FQ13275 785 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 MYLPFQ96A32 169 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 REXO5Q96IC2 774 aaKnown RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 MTSS1O43312 755 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 TRIM13O60858 407 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 MUTP22033 750 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 PSEN2P49810 448 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 CCDC153Q494R4 210 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 GPAT3Q53EU6 434 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 ARMCX4Q5H9R4 360 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 EPS8L1Q8TE68 723 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 PHF12Q96QT6 1004 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 UMODL1Q5DID0 1318 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 SMAPO00193 183 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 GZMAP12544 262 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 PRLRP16471 622 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 NCF4Q15080 339 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 FSCN1Q16658 493 aaKnown RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 TAF2Q6P1X5 1199 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 C1orf186Q6ZWK4 172 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 RALGPS2Q86X27 583 aaPredicted RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 ZCCHC9Q8N567 271 aaKnown RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 MTMR9Q96QG7 549 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 AVENQ9NQS1 362 aaPredicted RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 EFR3BQ9Y2G0 817 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 MRPS7Q9Y2R9 242 aaKnown RBP15.64■□□□□ 0.09
FNDC1-201ENST00000297267 C15orf41Q9Y2V0 281 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
FNDC1-201ENST00000297267 NRXN1Q9ULB1 1477 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms