RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ATP13A1Q9HD20 1204 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 NDFIP2Q9NV92 336 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
HMGB2-201ENST00000296503 MYO15AQ9UKN7 3530 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 NENFQ9UMX5 172 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 DOCK4Q8N1I0 1966 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 SPAG17Q6Q759 2223 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 BNIP3LO60238 219 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 CPP00450 1065 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PCK1P35558 622 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 TPMTP51580 245 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 TPI1P60174 286 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 RPS14P62263 151 aaKnown RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 CREB5Q02930 508 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 CA9Q16790 459 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ICE2Q659A1 982 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 HDXQ7Z353 690 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF564Q8TBZ8 553 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 GANCQ8TET4 914 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PTPRN2Q92932 1015 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PEBP4Q96S96 227 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PSMB7Q99436 277 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 CD93Q9NPY3 652 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 VPS51Q9UID3 782 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PPP2R2CQ9Y2T4 447 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 THADAQ6YHU6 1953 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 DMDP11532 3685 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 EEF2KO00418 725 aaKnown RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 RAMP2O60895 175 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 MT-CO1P00395 513 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 GLDCP23378 1020 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 OXTRP30559 389 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ACVRL1P37023 503 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ETFBP38117 255 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 POLD3Q15054 466 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 LONRF2Q1L5Z9 754 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 BOLA3Q53S33 107 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 PMS2CLQ68D20 193 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF776Q68DI1 518 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 RETSATQ6NUM9 610 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 LINGO4Q6UY18 593 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 ARMCX6Q7L4S7 300 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 FAM124AQ86V42 546 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 KIAA2013Q8IYS2 634 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 STK40Q8N2I9 435 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 CEP112Q8N8E3 955 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 DCAF4L2Q8NA75 395 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 HSPH1Q92598 858 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 RSPH9Q9H1X1 276 aaPredicted RBP12.36□□□□□ -0.43
HMGB2-201ENST00000296503 MAGEH1Q9H213 219 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 UVRAGQ9P2Y5 699 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
HMGB2-201ENST00000296503 EIF3CLB5ME19 914 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 ATP9BO43861 1147 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 ERLIN1O75477 346 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 SRCP12931 536 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 VAV1P15498 845 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 CD6P30203 668 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 ZBTB16Q05516 673 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 SFSWAPQ12872 951 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 CCDC6Q16204 474 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 KCNT1Q5JUK3 1230 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 PSTKQ8IV42 348 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 RTL3Q8N8U3 475 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 FRS2Q8WU20 508 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 ARHGEF2Q92974 986 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 EIF3CQ99613 913 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 DONSONQ9NYP3 566 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 WSB2Q9NYS7 404 aaPredicted RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
HMGB2-201ENST00000296503 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
HMGB2-201ENST00000296503 OTOGLQ3ZCN5 2332 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 K7ERQ8 282 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 FANCGO15287 622 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 FGF10O15520 208 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 EPN2O95208 641 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 IL1BP01584 269 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms