RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 C1orf74Q96LT6 269 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TRPM6Q9BX84 2022 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 BNIP3LO60238 219 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 DFNA5O60443 496 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 CYP1A1P04798 512 aaPredicted RBP25.85■■□□□ 1.73
U2AF1-201ENST00000291552 MAT2AP31153 395 aaKnown RBP25.85■■□□□ 1.73
U2AF1-201ENST00000291552 NXPH1P58417 271 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 SCAPQ12770 1279 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 FAM46CQ5VWP2 391 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 NAPEPLDQ6IQ20 393 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 LINGO4Q6UY18 593 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 FAM131BQ86XD5 332 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 MARCH9Q86YJ5 346 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 OR7D4Q8NG98 312 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 OR2A12Q8NGT7 310 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 C2orf49Q9BVC5 232 aaPredicted RBP25.85■■□□□ 1.73
U2AF1-201ENST00000291552 KDM4CQ9H3R0 1056 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 METTL5Q9NRN9 209 aaKnown RBP25.85■■□□□ 1.73
U2AF1-201ENST00000291552 TPX2Q9ULW0 747 aaKnown RBP25.85■■□□□ 1.73
U2AF1-201ENST00000291552 SIK3Q9Y2K2 1263 aa25.85■■□□□ 1.73
U2AF1-201ENST00000291552 C1QTNF3-AMACRE9PGA6 284 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 TNFSF14O43557 240 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 ZNF18P17022 549 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 POLR2FP61218 127 aaKnown RBP25.84■■□□□ 1.73
U2AF1-201ENST00000291552 KRT83P78385 493 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 CDR2Q01850 454 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 PIP5KL1Q5T9C9 394 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 ARCQ7LC44 396 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 TMPRSS7Q7RTY8 843 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 TRIM69Q86WT6 500 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 SPATS2Q86XZ4 545 aaKnown RBP25.84■■□□□ 1.73
U2AF1-201ENST00000291552 ATP11CQ8NB49 1132 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 CHST14Q8NCH0 376 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 SAP25Q8TEE9 199 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 ARRDC3Q96B67 414 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 NLRC4Q9NPP4 1024 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 FAM207AQ9NSI2 230 aaPredicted RBP25.84■■□□□ 1.73
U2AF1-201ENST00000291552 PAXBP1Q9Y5B6 917 aa25.84■■□□□ 1.73
U2AF1-201ENST00000291552 TDRD6O60522 2096 aaKnown RBP25.84■■□□□ 1.73
U2AF1-201ENST00000291552 CELSR3Q9NYQ7 3312 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 CBX4O00257 560 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 ENDOD1O94919 500 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 C22orf39Q6P5X5 142 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 LRRC31Q6UY01 552 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 PHLDB2Q86SQ0 1253 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 ZNF677Q86XU0 584 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 MSANTD4Q8NCY6 345 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 HAPLN3Q96S86 360 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 GDF3Q9NR23 364 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 FANCLQ9NW38 375 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 NBEAQ8NFP9 2946 aa25.83■■□□□ 1.73
U2AF1-201ENST00000291552 TLR4O00206 839 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 SRGAP2O75044 1071 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 ZNF821O75541 412 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-201ENST00000291552 ZMPSTE24O75844 475 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 GJB6O95452 261 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 MMP8P22894 467 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 EPHA8P29322 1005 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-201ENST00000291552 OR1E1P30953 314 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 CHRNA3P32297 505 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 SOX5P35711 763 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 ATP11AP98196 1134 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 C15orf59Q2T9L4 293 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-201ENST00000291552 PROSER1Q86XN7 944 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 JOSD2Q8TAC2 188 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 SLC30A5Q8TAD4 765 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 SKA1Q96BD8 255 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 C11orf70Q9BRQ4 267 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 FTSJ1Q9UET6 329 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 CA5BQ9Y2D0 317 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 CACNA1GO43497 2377 aa25.82■■□□□ 1.72
U2AF1-201ENST00000291552 MYLKQ15746 1914 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 ILVBLA1L0T0 632 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 PTP4A2Q12974 167 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 C6orf118Q5T5N4 469 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 MANEALQ5VSG8 457 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 PRPF39Q86UA1 669 aaKnown RBP25.81■■□□□ 1.72
U2AF1-201ENST00000291552 MFSD2AQ8NA29 543 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 PCDHB18PQ96TA0 734 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 TNKS2Q9H2K2 1166 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 PREBQ9HCU5 417 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 TMEM51Q9NW97 253 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 NEU3Q9UQ49 428 aa25.81■■□□□ 1.72
U2AF1-201ENST00000291552 CLCN6P51797 869 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 COPB1P53618 953 aaKnown RBP25.8■■□□□ 1.72
U2AF1-201ENST00000291552 INAVAQ3KP66 663 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 CCDC14Q49A88 953 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 ACBD5Q5T8D3 534 aaPredicted RBP25.8■■□□□ 1.72
U2AF1-201ENST00000291552 KANSL1Q7Z3B3 1105 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 TMIEQ8NEW7 156 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 RXFP2Q8WXD0 754 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 ZYG11BQ9C0D3 744 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 DMTF1Q9Y222 760 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 ACTL7AQ9Y615 435 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 ADAMTS20P59510 1910 aa25.8■■□□□ 1.72
U2AF1-201ENST00000291552 KPNA3O00505 521 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-201ENST00000291552 RNGTTO60942 597 aaKnown RBP25.79■■□□□ 1.72
U2AF1-201ENST00000291552 ARF5P84085 180 aa25.79■■□□□ 1.72
U2AF1-201ENST00000291552 BNIP3Q12983 259 aa25.79■■□□□ 1.72
U2AF1-201ENST00000291552 CDO1Q16878 200 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms