RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ZYG11BQ9C0D3 744 aa10.72□□□□□ -0.69
SNF8-201ENST00000290330 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
SNF8-201ENST00000290330 PPARGC1AQ9UBK2 798 aaKnown RBP10.72□□□□□ -0.69
SNF8-201ENST00000290330 TPX2Q9ULW0 747 aaKnown RBP10.72□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3DA0A087WVF3 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3IA0A087WXS9 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3EA0A087X179 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3KA0A087X1G2 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 A0A1W2PR77 199 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 ILVBLA1L0T0 632 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3FA6NER0 549 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3LB9A6J9 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 C1QTNF3-AMACRE9PGA6 284 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 H0Y8X5 98 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 WNT9AO14904 365 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 FLRT2O43155 660 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 SMAD6O43541 496 aaKnown RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 PLRG1O43660 514 aaKnown RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 PCDHGA12O60330 932 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 PROS1P07225 676 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 CTSLP07711 333 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3HP0C7X1 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 FTH1P19P0C7X4 201 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 KRT3P12035 628 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 GLDCP23378 1020 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 RRM1P23921 792 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 RFC1P35251 1148 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 ADRA1BP35368 520 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 CLCN6P51797 869 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 GSCP56915 257 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 C21orf59P57076 290 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 PPP2CBP62714 309 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 PPP2CAP67775 309 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 CNTN1Q12860 1018 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 SUZ12Q15022 739 aaKnown RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 CLEC16AQ2KHT3 1053 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 ARL13BQ3SXY8 428 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 POM121L1PQ3SYA9 428 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 MANEALQ5VSG8 457 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 AGBL4Q5VU57 503 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3GQ6DHY5 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3CQ6IPX1 549 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 SARM1Q6SZW1 724 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 LINGO4Q6UY18 593 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 ZNF783Q6ZMS7 281 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 PHF13Q86YI8 300 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D3Q8IZP1 549 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 CHCHD4Q8N4Q1 142 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 OR7D4Q8NG98 312 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 OR2A12Q8NGT7 310 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 BAHD1Q8TBE0 780 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 RHBDD1Q8TEB9 315 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 CENPIQ92674 756 aaPredicted RBP10.71□□□□□ -0.69
SNF8-201ENST00000290330 GATA6Q92908 595 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 AGPAT1Q99943 283 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 SPON2Q9BUD6 331 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 MAGEB5Q9BZ81 275 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 AASDHPPTQ9NRN7 309 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 ADAM22Q9P0K1 906 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 ARHGAP20Q9P2F6 1191 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 BTBD3Q9Y2F9 522 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 MSRB2Q9Y3D2 182 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 NEUROG3Q9Y4Z2 214 aa10.71□□□□□ -0.69
SNF8-201ENST00000290330 TCRBV5S1A1TA0A578 114 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 FAM221BA6H8Z2 402 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CBX4O00257 560 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 DFNA5O60443 496 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 ZNF821O75541 412 aaPredicted RBP10.7□□□□□ -0.7
SNF8-201ENST00000290330 ZMPSTE24O75844 475 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 KRT37O76014 449 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CALB1P05937 261 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
SNF8-201ENST00000290330 CD38P28907 300 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CDC25BP30305 580 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CHRNA3P32297 505 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 CCT8P50990 548 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 HDAC4P56524 1084 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 TAS2R38P59533 333 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 NRG1Q02297 640 aaPredicted RBP10.7□□□□□ -0.7
SNF8-201ENST00000290330 GNA12Q03113 381 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 IQCB1Q15051 598 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 PRAMEF14Q5SWL7 426 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 RETSATQ6NUM9 610 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 C22orf39Q6P5X5 142 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 WDR59Q6PJI9 974 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 MON1BQ7L1V2 547 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 SLCO6A1Q86UG4 719 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 LUZP1Q86V48 1076 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 PNPLA1Q8N8W4 532 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 TMIEQ8NEW7 156 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 ADAMTS14Q8WXS8 1223 aa10.7□□□□□ -0.7
SNF8-201ENST00000290330 SKA1Q96BD8 255 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms