RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 AADATQ8N5Z0 425 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 SEMA4DQ92854 862 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 RAD51AP1Q96B01 352 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 CHP1Q99653 195 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 IRGMA1A4Y4 181 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 STK4Q13043 487 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 STK40Q8N2I9 435 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 BPIFB6Q8NFQ5 453 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 ALKBH4Q9NXW9 302 aa13.39□□□□□ -0.27
SMARCA5-201ENST00000283131 MCAMP43121 646 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CUL2Q13617 745 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 RTL4Q6ZR62 310 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 ACOT1Q86TX2 421 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PARGQ86W56 976 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 EFHD2Q96C19 240 aaPredicted RBP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 MIR1-1HGQ9H1L0 117 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 MORF4L1Q9UBU8 362 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 RGS8P57771 180 aaPredicted RBP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 DENND5AQ6IQ26 1287 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CACUL1Q86Y37 369 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 TNFAIP8L1Q8WVP5 186 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 RGSL1A5PLK6 1076 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 LRRC34Q8IZ02 419 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CCDC86Q9H6F5 360 aaKnown RBP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 BTN3A1O00481 513 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PTPN4P29074 926 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 SEC24CP53992 1094 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CXorf40AQ8TE69 158 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 GNPTGQ9UJJ9 305 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CCL15-CCL14A0A0B4J2E2 113 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 POMCP01189 267 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 ZNF806P0C7X5 589 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 ME2P23368 584 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PRDX5P30044 214 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 RPA3P35244 121 aaPredicted RBP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 CCL15Q16663 113 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PSMA8Q8TAA3 256 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 MLXQ9UH92 298 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 O00370 1275 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 PTPN5P54829 565 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 MGAT5Q09328 741 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 SLC26A11Q86WA9 606 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 FNDC11Q9BVV2 318 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 IFT46Q9NQC8 304 aa13.38□□□□□ -0.27
SMARCA5-201ENST00000283131 NTRK1P04629 796 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 IRAK1P51617 712 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 FAM91A1Q658Y4 838 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 WDR59Q6PJI9 974 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ZNF607Q96SK3 696 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.274e-7■■■■□ 24.6
SMARCA5-201ENST00000283131 UXTQ9UBK9 157 aaPredicted RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 CDH7Q9ULB5 785 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 PCDHGB5Q9Y5G0 923 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 METTL18O95568 372 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 CATP04040 527 aaKnown RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 VIL1P09327 827 aaKnown RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 DBTP11182 482 aaKnown RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ITIH1P19827 911 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ECHS1P30084 290 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 AP3S2P59780 193 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 CRY1Q16526 586 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 CES5AQ6NT32 575 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 COLGALT1Q8NBJ5 622 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 CHST4Q8NCG5 386 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 DNAJA4Q8WW22 397 aaPredicted RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 TNPO3Q9Y5L0 923 aaKnown RBP13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 SRGNP10124 158 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 TNFAIP8L3Q5GJ75 292 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 HYIQ5T013 277 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
SMARCA5-201ENST00000283131 DENND6BQ8NEG7 585 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms