RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 OR51B4Q9Y5P0 310 aa13.08□□□□□ -0.32
CD44-203ENST00000278386 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.32
CD44-203ENST00000278386 ARID1BQ8NFD5 2236 aaPredicted RBP13.08□□□□□ -0.32
CD44-203ENST00000278386 E9PAM4 449 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 PRAMEF26H0Y7S4 382 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 F9P00740 461 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 CTSLP07711 333 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 JUPP14923 745 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 CYP11B1P15538 503 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 PRLRP16471 622 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 CHRNA3P32297 505 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
CD44-203ENST00000278386 CXCR3P49682 368 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 DPCR1Q3MIW9 517 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 HES3Q5TGS1 186 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 LINGO4Q6UY18 593 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 ERICH1Q86X53 443 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
CD44-203ENST00000278386 DCAF4L2Q8NA75 395 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 KLK6Q92876 244 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 TNKS2Q9H2K2 1166 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 CLSTN2Q9H4D0 955 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 ERVMER34-1Q9H9K5 563 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 FZD3Q9NPG1 666 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 TMPRSS4Q9NRS4 437 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 URB1O60287 2271 aaKnown RBP13.07□□□□□ -0.32
CD44-203ENST00000278386 CHD5Q8TDI0 1954 aa13.07□□□□□ -0.32
CD44-203ENST00000278386 A0A0D9SEW6 157 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 K7ERQ8 282 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 SLC31A1O15431 190 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 MT-CO1P00395 513 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 PRNPP04156 253 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 C1SP09871 688 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 THEGLP0DJG4 465 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CDK4P11802 303 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 OR1E1P30953 314 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
CD44-203ENST00000278386 FLT3P36888 993 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 GABRB2P47870 512 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 RXRGP48443 463 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CLCN6P51797 869 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 OVGP1Q12889 678 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 HS1BP3Q53T59 392 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 C2CD6Q53TS8 623 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 SFMBT2Q5VUG0 894 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
CD44-203ENST00000278386 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 OR7D4Q8NG98 312 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 ARRDC3Q96B67 414 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
CD44-203ENST00000278386 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 PPP1R16AQ96I34 528 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 LRIG1Q96JA1 1093 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 NBEAQ8NFP9 2946 aa13.06□□□□□ -0.32
CD44-203ENST00000278386 KNTC1P50748 2209 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 I6L893 689 aaPredicted RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 ENDOD1O94919 500 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 PCDH8O95206 1070 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 LSM8O95777 96 aaKnown RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 MMEP08473 750 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 GLDCP23378 1020 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 AKT2P31751 481 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 SCNN1AP37088 669 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 TAS2R38P59533 333 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 DAB2P98082 770 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 NAA35Q5VZE5 725 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 NOP9Q86U38 636 aaKnown RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 HORMAD1Q86X24 394 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 DRC7Q8IY82 874 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 ZNF683Q8IZ20 524 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 NUP62CLQ9H1M0 184 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 ATP13A1Q9HD20 1204 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 METTL5Q9NRN9 209 aaKnown RBP13.05□□□□□ -0.32
CD44-203ENST00000278386 IL36AQ9UHA7 158 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 AK5Q9Y6K8 562 aa13.05□□□□□ -0.32
CD44-203ENST00000278386 ITPR1Q14643 2758 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms