RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 VIL1P09327 827 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TYMPP19971 482 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 BMPR2Q13873 1038 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 POU6F1Q14863 301 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CRY1Q16526 586 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 OTUD3Q5T2D3 398 aaPredicted RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ILDR2Q71H61 639 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DGCR14Q96DF8 476 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 GGA3Q9NZ52 723 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TPD52L2O43399 206 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CASP4P49662 377 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TKTL1P51854 596 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 VMP1Q96GC9 406 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 SEMA4AQ9H3S1 761 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 MFHAS1Q9Y4C4 1052 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 HMGCRP04035 888 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 LTA4HP09960 611 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 COX7A2P14406 83 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 MFSD7Q6UXD7 560 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 PTCD3Q96EY7 689 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 TEKT5Q96M29 485 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 OR6B1O95007 311 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 HIST1H2ABP04908 130 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 PPIBP23284 216 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 DLG4P78352 724 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 FCHO2Q0JRZ9 810 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CBWD3Q5JTY5 395 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CBWD5Q5RIA9 395 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 HIST3H2AQ7L7L0 130 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 PAGE2Q7Z2X7 111 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 EEF1AKMT1Q8WVE0 214 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 HIST1H2ACQ93077 130 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 ERLEC1Q96DZ1 483 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 THG1LQ9NWX6 298 aaKnown RBP8.09□□□□□ -1.11
LIMD1-201ENST00000273317 NINJ2Q9NZG7 142 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CNTNAP2Q9UHC6 1331 aa8.09□□□□□ -1.11
LIMD1-201ENST00000273317 CBX4O00257 560 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 IDH3BO43837 385 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 ACADLP28330 430 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 MMP13P45452 471 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 MAPK9P45984 424 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 ALDH9A1P49189 494 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 R3HCC1LQ7Z5L2 792 aaKnown RBP8.09□□□□□ -1.12
LIMD1-201ENST00000273317 TMEM86AQ8N2M4 240 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 PCSK9Q8NBP7 692 aaKnown RBP8.09□□□□□ -1.12
LIMD1-201ENST00000273317 POLR1BQ9H9Y6 1135 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 PXMP2Q9NR77 195 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 ERGIC3Q9Y282 383 aa8.09□□□□□ -1.12
LIMD1-201ENST00000273317 MTF2Q9Y483 593 aaPredicted RBP8.09□□□□□ -1.12
LIMD1-201ENST00000273317 LOC100506127A0A0U1RQW1 187 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SLC12A8A0AV02 714 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TCEA2Q15560 299 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CCSAPQ6IQ19 270 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 POMGNT2Q8NAT1 580 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PPP3R2Q96LZ3 170 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TSPAN18Q96SJ8 248 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 NUDT5Q9UKK9 219 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 LGALS3BPQ08380 585 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 MEA1Q16626 185 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 RETSATQ6NUM9 610 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 IL27RAQ6UWB1 636 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 IFNLR1Q8IU57 520 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 LPCAT1Q8NF37 534 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SYNPO2Q9UMS6 1093 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 VPS4AQ9UN37 437 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 INVSQ9Y283 1065 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 DIDO1Q9BTC0 2240 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 IL2P60568 153 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SLC6A3Q01959 620 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PDPRQ8NCN5 879 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SPATA13Q96N96 652 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 FAM126AQ9BYI3 521 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ADGRB2O60241 1585 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 SPATA31D1Q6ZQQ2 1576 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 AGLP35573 1532 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 ARID1BQ8NFD5 2236 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CKMP06732 381 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 IDO1P14902 403 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CES1P23141 567 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 CLCN5P51795 746 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 COPZ1P61923 177 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 TRAP1Q12931 704 aaKnown RBP8.08□□□□□ -1.12
LIMD1-201ENST00000273317 PDK3Q15120 406 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 AGMOQ6ZNB7 445 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 FAM92BQ6ZTR7 304 aa8.08□□□□□ -1.12
LIMD1-201ENST00000273317 MIB1Q86YT6 1006 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms