RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FGFR1OP2Q9NVK5 253 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 NFS1Q9Y697 457 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 MATN3O15232 486 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 COCHO43405 550 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 FAM155BO75949 473 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 SEC24AO95486 1093 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 EZRP15311 586 aaKnown RBP9.49□□□□□ -0.89
SSR3-201ENST00000265044 DMTNQ08495 405 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 ZBTB17Q13105 803 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 DNAJC3Q13217 504 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 KCNJ11Q14654 390 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 TAZQ16635 292 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 TAF1BQ53T94 588 aaPredicted RBP9.49□□□□□ -0.89
SSR3-201ENST00000265044 SLC8B1Q6J4K2 584 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 NUDCD3Q8IVD9 361 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 POF1BQ8WVV4 589 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 TM6SF2Q9BZW4 377 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 ANLNQ9NQW6 1124 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 CFAP97Q9P2B7 532 aa9.49□□□□□ -0.89
SSR3-201ENST00000265044 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
SSR3-201ENST00000265044 GOLGA4Q13439 2230 aaKnown RBP9.49□□□□□ -0.89
SSR3-201ENST00000265044 J3KR12 359 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 PER2O15055 1255 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 XYLBO75191 536 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 CNPP09543 421 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 HSPA8P11142 646 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 NPY2RP49146 381 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 RPL34P49207 117 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 WNT3AP56704 352 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SEMA5AQ13591 1074 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 PIK3R6Q5UE93 754 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 CYP4X1Q8N118 509 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 MCUQ8NE86 351 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 RAD9AQ99638 391 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 GBA3Q9H227 469 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SCUBE2Q9NQ36 999 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SEPT3Q9UH03 358 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 DCTN4Q9UJW0 460 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SLC8A2Q9UPR5 921 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 C2orf78A6NCI8 922 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 ZNF840PA6NDX5 716 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 PFDN6O15212 129 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 BAIAP3O94812 1187 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 AP2A1O95782 977 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 ATF6P18850 670 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 DSG1Q02413 1049 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 MPP3Q13368 585 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TCTN1Q2MV58 587 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 LRRC8BQ6P9F7 803 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TRMT10BQ6PF06 316 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 LINGO4Q6UY18 593 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 PTAR1Q7Z6K3 402 aaPredicted RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 KCNMB4Q86W47 210 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TDRD5Q8NAT2 981 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 PPP4R1Q8TF05 950 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 ZNF473Q8WTR7 871 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 SLC22A17Q8WUG5 538 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 MFSD3Q96ES6 412 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SPATA17Q96L03 361 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 IL22Q9GZX6 179 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 CHRAC1Q9NRG0 131 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 MRPS23Q9Y3D9 190 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 INPPL1O15357 1258 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 CLDN11O75508 207 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 HTR7P34969 479 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 DSC2Q02487 901 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 SLC10A7Q0GE19 358 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 GALNT2Q10471 571 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 WASHC5Q12768 1159 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 GPNMBQ14956 572 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
SSR3-201ENST00000265044 IGDCC3Q8IVU1 814 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 LRRC34Q8IZ02 419 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 IGSF8Q969P0 613 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 FAM136AQ96C01 138 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 ASIC4Q96FT7 647 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 FAM53CQ9NYF3 392 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 GGT7Q9UJ14 662 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 RABGEF1Q9UJ41 708 aa9.48□□□□□ -0.89
SSR3-201ENST00000265044 TBC1D4O60343 1298 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 KITP10721 976 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 CDC25CP30307 473 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 ACVRL1P37023 503 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 YBEYP58557 167 aaPredicted RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 GPX6P59796 221 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 SKOR1P84550 965 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 GNA12Q03113 381 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 RAD51Q06609 339 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 LBRQ14739 615 aaKnown RBP9.47□□□□□ -0.89
SSR3-201ENST00000265044 RETSATQ6NUM9 610 aa9.47□□□□□ -0.89
SSR3-201ENST00000265044 EXT2Q93063 718 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms