RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NR1D2Q14995 579 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 SLC25A24Q6NUK1 477 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 ZBTB46Q86UZ6 589 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 GMCL1Q96IK5 515 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 MBOAT7Q96N66 472 aa18.24■□□□□ 0.51
COL5A3-201ENST00000264828 TISP43B9A030 160 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 FSBPO95073 299 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 NFKB1P19838 968 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 SLC6A3Q01959 620 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 PROSER1Q86XN7 944 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 FAM20CQ8IXL6 584 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 OR52K1Q8NGK4 314 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 PCDHB5Q9Y5E4 795 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 CDK7P50613 346 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 ATN1P54259 1190 aaPredicted RBP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 MAML3Q96JK9 1138 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 ABCB10Q9NRK6 738 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 INSRRP14616 1297 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 TSPAN8P19075 237 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 NDUFAF6Q330K2 333 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 NBPF12Q5TAG4 269 aaPredicted RBP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 NET1Q7Z628 596 aaPredicted RBP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 LRRN4Q8WUT4 740 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 REPS1Q96D71 796 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 KAZALD1Q96I82 304 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 FAM192AQ9GZU8 254 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 ZFYVE1Q9HBF4 777 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 FBXO6Q9NRD1 293 aaPredicted RBP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 ARL15Q9NXU5 204 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 ENOPH1Q9UHY7 261 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 KRT36O76013 467 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 TBX2Q13207 712 aaPredicted RBP18.23■□□□□ 0.51
COL5A3-201ENST00000264828 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 AHCYL1O43865 530 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 PRKAG1P54619 331 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 PDK3Q15120 406 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 TAB1Q15750 504 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 MROH8Q9H579 483 aa18.23■□□□□ 0.51
COL5A3-201ENST00000264828 HACD1B0YJ81 288 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 SLITRK3O94933 977 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 NTRK1P04629 796 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 CYP1A1P04798 512 aaPredicted RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 PTDSS1P48651 473 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 NTRK3Q16288 839 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 HIPK1Q86Z02 1210 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 ADHFE1Q8IWW8 467 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 A0A0B4J269 797 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 BUD23O43709 281 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 KCNJ2P63252 427 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 C15orf59Q2T9L4 293 aaPredicted RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 ZDHHC17Q8IUH5 632 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 AHI1Q8N157 1196 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 FNIP1Q8TF40 1166 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 PGM2Q96G03 612 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TBCBQ99426 244 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 IQCMA0A1B0GVH7 501 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TRDMT1O14717 391 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 RGL2O15211 777 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 PEX11AO75192 247 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 PTPN3P26045 913 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 IFNGR2P38484 337 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 DLG4P78352 724 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 INO80DQ53TQ3 878 aaPredicted RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 CKAP2Q8WWK9 683 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 RNPEPL1Q9HAU8 725 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 BTBD3Q9Y2F9 522 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TCRBV5S4A2TA0A5A2 114 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 ALDH2P05091 517 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 DCTN2Q13561 401 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TAF13Q15543 124 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TSPAN14Q8NG11 270 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 DNAJB14Q8TBM8 379 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 REXO5Q96IC2 774 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 WARSP23381 471 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 KDELR1P24390 212 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 HLA-DQA1Q5Y7H0 255 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 ZC3H7AQ8IWR0 971 aaKnown RBP18.22■□□□□ 0.51
COL5A3-201ENST00000264828 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 BTRCQ9Y297 605 aa18.22■□□□□ 0.51
COL5A3-201ENST00000264828 DBTP11182 482 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 COX4I1P13073 169 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 ERCC2P18074 760 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 MMP13P45452 471 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 SGCGQ13326 291 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 TCEA2Q15560 299 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 RGS21Q2M5E4 152 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 SLC39A12Q504Y0 691 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 PYDC2Q56P42 97 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 METTL7BQ6UX53 244 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 OR7A2PQ8NGA2 310 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 AKT1S1Q96B36 256 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 PDCD2LQ9BRP1 358 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms