RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 TPP1O14773 563 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 TLR5O60602 858 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 GCATO75600 419 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 PLD1Q13393 1074 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 SLC44A1Q8WWI5 657 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 CATSPERBQ9H7T0 1116 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 OSER1Q9NX31 292 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 SENP1Q9P0U3 644 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 ZSWIM8A7E2V4 1837 aa13.71□□□□□ -0.21
TNFRSF8-201ENST00000263932 GARSP41250 739 aaKnown RBP13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 USP4Q13107 963 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 CRYMQ14894 314 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 LGI2Q8N0V4 545 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 WDR60Q8WVS4 1066 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 TMEM169Q96HH4 297 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 NSL1Q96IY1 281 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 SIGLEC10Q96LC7 697 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 PLK2Q9NYY3 685 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 ACTL7AQ9Y615 435 aa13.71□□□□□ -0.22
TNFRSF8-201ENST00000263932 MOXD2PA6NHM9 499 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 NVLO15381 856 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ADAM12O43184 909 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ETS2P15036 469 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SERPINB5P36952 375 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 STX3Q13277 289 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PDK4Q16654 411 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ADGRD1Q6QNK2 874 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 EGFL6Q8IUX8 553 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PSTKQ8IV42 348 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PLA2G4CQ9UP65 541 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 E9PAM4 449 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 IRAK2O43187 625 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PRKCGP05129 697 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ITGA9Q13797 1035 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 TAZQ16635 292 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SCD5Q86SK9 330 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ERLEC1Q96DZ1 483 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SLC2A13Q96QE2 648 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 UPF3AQ9H1J1 476 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SHROOM3Q8TF72 1996 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SPECC1L-ADORA2AF8WAN1 911 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 J3KR12 359 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SORBS2O94875 1100 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 GM2AP17900 193 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 CD86P42081 329 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 USP10Q14694 798 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 TEX44Q53QW1 395 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 ALFQ53S48 1182 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 RGS18Q9NS28 235 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
TNFRSF8-201ENST00000263932 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■■ 155.1
TNFRSF8-201ENST00000263932 PRR5-ARHGAP8B1AHC4 643 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 NMBRP28336 390 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 NME5P56597 212 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 COG7P83436 770 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 ARHGAP8P85298 464 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 SATB1Q01826 763 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 ZNF235Q14590 738 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 ZNF460Q14592 562 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 CNGA3Q16281 694 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 GALNT4Q8N4A0 578 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 UTP4Q969X6 686 aaKnown RBP13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 GBP5Q96PP8 586 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 CBX4O00257 560 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 CCDC22O60826 627 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 ZWINTO95229 277 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 HSPA4LO95757 839 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 GSTA1P08263 222 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 BTG3Q14201 252 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 TEX9Q8N6V9 391 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 PSMG2Q969U7 264 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 A8MX80 341 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 MAP3K7O43318 606 aa13.69□□□□□ -0.22
TNFRSF8-201ENST00000263932 CCNHP51946 323 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms