RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GSPT2Q8IYD1 628 aaKnown RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ZNF567Q8N184 647 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 IFT81Q8WYA0 676 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 E2F7Q96AV8 911 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 RUNDC3BQ96NL0 473 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 AGAP3Q96P47 875 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 TRMT61BQ9BVS5 477 aaKnown RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 PARD6BQ9BYG5 372 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 SP110Q9HB58 689 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 MARK1Q9P0L2 795 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 VPS28Q9UK41 221 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 COL4A3Q01955 1670 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ATG2BQ96BY7 2078 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CFAP69A5D8W1 941 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ANTXRLA6NF34 631 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 MATN3O15232 486 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ZBTB24O43167 697 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 KDELR3O43731 214 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 PRAMEF11O60813 436 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 GCATO75600 419 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 GJB3O75712 270 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ZMPSTE24O75844 475 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 METTL18O95568 372 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 NFATC1O95644 943 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ADH1CP00326 375 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 MT-CO1P00395 513 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 MYBL2P10244 700 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 IL9P15248 144 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CD68P34810 354 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 SOX9P48436 509 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CARSP49589 748 aaKnown RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 VSNL1P62760 191 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 GAD2Q05329 585 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 IL10RBQ08334 325 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 RUNX3Q13761 415 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 PDGFRLQ15198 375 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 SMAD2Q15796 467 aaKnown RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 P3H1Q32P28 736 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 LEXMQ3ZCV2 418 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 FUT11Q495W5 492 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 TMEM215Q68D42 235 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CCDC70Q6NSX1 233 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 MTSS1LQ765P7 747 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 PID1Q7Z2X4 250 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CCDC117Q8IWD4 279 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 SFTPA1Q8IWL2 248 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CNTD1Q8N815 330 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 MAFAQ8NHW3 353 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ATP2A3Q93084 1043 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 RTP4Q96DX8 246 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 CHFRQ96EP1 664 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 PHF7Q9BWX1 381 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 ACE2Q9BYF1 805 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 BRD8Q9H0E9 1235 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 NEUROG2Q9H2A3 272 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 RETREG1Q9H6L5 497 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 KCNK12Q9HB15 430 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 DNAJC17Q9NVM6 304 aaKnown RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 RBM22Q9NW64 420 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■■ 28.1
SNRNP40-201ENST00000263694 DONSONQ9NYP3 566 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 KIAA1522Q9P206 1035 aaPredicted RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 VPS51Q9UID3 782 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 TTLL3Q9Y4R7 772 aa9.93□□□□□ -0.82
SNRNP40-201ENST00000263694 A0A0A0MRY4 1105 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TCRBV7S3A2A0A539 114 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 C5orf60A6NFR6 353 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 K7ERQ8 282 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 MUSKO15146 869 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CHADO15335 359 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TULP3O75386 442 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CD160O95971 181 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 HLA-DQB2P05538 268 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CISD3P0C7P0 127 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 STK19P49842 368 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 MAXP61244 160 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ARF5P84085 180 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 KDSRQ06136 332 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GEN1Q17RS7 908 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PLEKHG6Q3KR16 790 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TEX44Q53QW1 395 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PITRM1Q5JRX3 1037 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ANKRD22Q5VYY1 191 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ARHGEF18Q6ZSZ5 1173 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SYDE1Q6ZW31 735 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PGBD5Q8N414 524 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 KIAA1958Q8N8K9 716 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SORCS1Q8WY21 1168 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 RPL10LQ96L21 214 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SPATA13Q96N96 652 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GORASP1Q9BQQ3 440 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 BRD9Q9H8M2 597 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PDFQ9HBH1 243 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms