RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 SYNE3Q6ZMZ3 975 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 CCDC129Q6ZRS4 1044 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 KRT77Q7Z794 578 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 SCN4BQ8IWT1 228 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 OR8H2Q8N162 312 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 LSMEM1Q8N8F7 131 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 C1orf131Q8NDD1 294 aaKnown RBP2.38□□□□□ -2.03
ATF1-201ENST00000262053 ETNPPLQ8TBG4 499 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 METTL6Q8TCB7 284 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 ATP2A3Q93084 1043 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 ZNF845Q96IR2 970 aaPredicted RBP2.38□□□□□ -2.03
ATF1-201ENST00000262053 C5orf34Q96MH7 638 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 CLPBQ9H078 707 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 USP44Q9H0E7 712 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 RIOX1Q9H6W3 641 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 SFXN1Q9H9B4 322 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 NKIRAS2Q9NYR9 191 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 MPP6Q9NZW5 540 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 TLK1Q9UKI8 766 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 ADAMTS5Q9UNA0 930 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 PCDHB2Q9Y5E7 798 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 COL11A2P13942 1736 aaPredicted RBP2.38□□□□□ -2.03
ATF1-201ENST00000262053 ABCA8O94911 1581 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 RALGAPBQ86X10 1494 aa2.38□□□□□ -2.03
ATF1-201ENST00000262053 SMIM22K7EJ46 135 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TAF4O00268 1085 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PRYO14603 147 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ORC4O43929 436 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PLOD3O60568 738 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TIPRLO75663 272 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 KAT7O95251 611 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TTLL1O95922 423 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 NUDT3O95989 172 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CDK4P11802 303 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 APEHP13798 732 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 NDUFS1P28331 727 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 AVPR2P30518 371 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 HOXD12P35452 270 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 HNF1BP35680 557 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 GGT5P36269 586 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 MTNR1AP48039 350 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CDH15P55291 814 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 SLC37A1P57057 533 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 WDR5P61964 334 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 RPL7AP62424 266 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 MRPS21P82921 87 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 DMWDQ09019 674 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CUL4AQ13619 759 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 GXYLT1Q4G148 440 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 GLE1Q53GS7 698 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 AKNAD1Q5T1N1 836 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 FAM69AQ5T7M9 428 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PDXDC1Q6P996 788 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ATF7IPQ6VMQ6 1270 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 KRT74Q7RTS7 529 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ZNF804AQ7Z570 1209 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ADGRG6Q86SQ4 1221 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 NOC3LQ8WTT2 800 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 RAB40AQ8WXH6 277 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 NCSTNQ92542 709 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TBC1D5Q92609 795 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 AKAP1Q92667 903 aaKnown RBP eCLIP2.37□□□□□ -2.03
ATF1-201ENST00000262053 NPLQ9BXD5 320 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 ITPAQ9BY32 194 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PRKRIP1Q9H875 184 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 VEZTQ9HBM0 779 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TLR8Q9NR97 1041 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 PLSCR4Q9NRQ2 329 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 DIAPH3Q9NSV4 1193 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ALKBH4Q9NXW9 302 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 BCCIPQ9P287 314 aaKnown RBP eCLIP2.37□□□□□ -2.03
ATF1-201ENST00000262053 KLQ9UEF7 1012 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 VPS28Q9UK41 221 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 SARDHQ9UL12 918 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 B3GNT3Q9Y2A9 372 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PKP3Q9Y446 797 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PSAT1Q9Y617 370 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 SIRT4Q9Y6E7 314 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 PIAS3Q9Y6X2 628 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 SHPRHQ149N8 1683 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 KIF14Q15058 1648 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ARHGAP23Q9P227 1491 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 PTPRGP23470 1445 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ZCCHC11Q5TAX3 1644 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 AGAP14A8MT82 685 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 C17orf100A8MU93 164 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 TTC34A8MYJ7 566 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 GCOM1H8Y6P7 765 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 GTPBP1O00178 669 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 CCNT1O60563 726 aaKnown RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 EXOC3O60645 756 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 SEC14L2O76054 403 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CHRM4P08173 479 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CYP4B1P13584 511 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 HOXB9P17482 250 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 ATF7P17544 494 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 NDUFB7P17568 137 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 CDH2P19022 906 aaPredicted RBP2.37□□□□□ -2.03
ATF1-201ENST00000262053 MAPK4P31152 587 aa2.37□□□□□ -2.03
ATF1-201ENST00000262053 ABCD1P33897 745 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms