RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CALRP27797 417 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 PRDX3P30048 256 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 ADAM15Q13444 863 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 KIAA0040Q15053 153 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 MAPK11Q15759 364 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM78AQ5JUQ0 283 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CERCAMQ5T4B2 595 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 DTWD1Q8N5C7 304 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 UCN3Q969E3 161 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 HMCESQ96FZ2 354 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 IMP4Q96G21 291 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 OSBPL1AQ9BXW6 950 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF717Q9BY31 904 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CASS4Q9NQ75 786 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SPDYE4A6NLX3 237 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC38A8A6NNN8 435 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 DAB1O75553 588 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC35E2BP0CK96 405 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 GARSP41250 739 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CREB5Q02930 508 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 HSP90B2PQ58FF3 399 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CEP128Q6ZU80 1094 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CLNKQ7Z7G1 428 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 AADATQ8N5Z0 425 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 GIPC2Q8TF65 315 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TEKT4Q8WW24 435 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 NUP58Q9BVL2 599 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 GCOM2Q9BZD3 368 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CHRAC1Q9NRG0 131 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 ADAM22Q9P0K1 906 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 MYO1AQ9UBC5 1043 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 UBQLN1Q9UMX0 589 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 YIPF1Q9Y548 306 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 INSL5Q9Y5Q6 135 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CHD3Q12873 2000 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 PES1O00541 588 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TBCAO75347 108 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 FERP16591 822 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TMOD1P28289 359 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 RPL9P32969 192 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CFHR1Q03591 330 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TRIP13Q15645 432 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 GALNTL6Q49A17 601 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TMEM31Q5JXX7 168 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CHST14Q8NCH0 376 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 NEK11Q8NG66 645 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 FATE1Q969F0 183 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 BOCQ9BWV1 1114 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 P2RY12Q9H244 342 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SUDS3Q9H7L9 328 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TRPV4Q9HBA0 871 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 PCDHB4Q9Y5E5 795 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 HIVEP1P15822 2718 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 NCOA6Q14686 2063 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM159BA6NKW6 160 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 DLGAP1O14490 977 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 GCATO75600 419 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 NMBRP28336 390 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 BMPR1AP36894 532 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CCSMST1Q4G0I0 132 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 EFHC2Q5JST6 749 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TCERG1LQ5VWI1 586 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SLFN12LQ6IEE8 588 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TMEM92Q6UXU6 159 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 DNAJB7Q7Z6W7 309 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC22A18ASQ8N1D0 253 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 OR2A12Q8NGT7 310 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 HDAC11Q96DB2 347 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 TSGA13Q96PP4 275 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 MGME1Q9BQP7 344 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 BEGAINQ9BUH8 593 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 MKRN2Q9H000 416 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 RPF1Q9H9Y2 349 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 CDH9Q9ULB4 789 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 EFR3BQ9Y2G0 817 aa5.77□□□□□ -1.49
TOPBP1-201ENST00000260810 IGLV3-16A0A075B6K0 115 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 H0Y858 1186 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ITM2AO43736 263 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ERLIN1O75477 346 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RHOXF2BP0C7M4 288 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 LCP1P13796 627 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RFX1P22670 979 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF140P52738 457 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 MAXP61244 160 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RBP5P82980 135 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SERINC3Q13530 473 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CCINQ13939 588 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 PPP2R5EQ16537 467 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 DUSP6Q16828 381 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RFX8Q6ZV50 586 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TMPRSS9Q7Z410 1059 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 LDB1Q86U70 411 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 DENND6AQ8IWF6 608 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CELF6Q96J87 481 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 HSFY1Q96LI6 401 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RMDN2Q96LZ7 410 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 RHOXF2Q9BQY4 288 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 WFDC6Q9BQY6 131 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms