RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TARSL2A2RTX5 802 aaKnown RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 WASH4PA8MWX3 477 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 STK19P49842 368 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 CAMK2GQ13555 558 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 ZSCAN26Q16670 478 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 TXNRD3NBQ6F5E7 133 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 DCAF4L2Q8NA75 395 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 HSPH1Q92598 858 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 PHOX2BQ99453 314 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 SPON2Q9BUD6 331 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 TSGA10Q9BZW7 698 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 SLC25A13Q9UJS0 675 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 PROB1E7EW31 1015 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 ATP1A1P05023 1023 aaKnown RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 GOT1P17174 413 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 NDUFV2P19404 249 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 MAN1A1P33908 653 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 ETFBP38117 255 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 SRSF5Q13243 272 aaKnown RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 DPYSL2Q16555 572 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 HNRNPA1L2Q32P51 320 aaKnown RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 MRGPRX1Q96LB2 322 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 MKRN2Q9H000 416 aaKnown RBP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 MAGEH1Q9H213 219 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 ATP13A1Q9HD20 1204 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 PRSS16Q9NQE7 514 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.15■□□□□ 0.34
SDCBP-201ENST00000260130 DONSONQ9NYP3 566 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
SDCBP-201ENST00000260130 TMEM110-MUSTN1A8MSY1 372 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 TTC34A8MYJ7 566 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 ENC1O14682 589 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 DAPK3O43293 454 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 SNAP91O60641 907 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 RAMP2O60895 175 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 HCAR3P49019 387 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 GYS2P54840 703 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
SDCBP-201ENST00000260130 IL31Q6EBC2 164 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 RFX8Q6ZV50 586 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 CPNE8Q86YQ8 564 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 GAB3Q8WWW8 586 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.33
SDCBP-201ENST00000260130 MTG2Q9H4K7 406 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 USP34Q70CQ2 3546 aa17.14■□□□□ 0.33
SDCBP-201ENST00000260130 CBX4O00257 560 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 RPP40O75818 363 aaKnown RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 NOP2P46087 812 aaKnown RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 COPAP53621 1224 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 TMPRSS6Q8IU80 811 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 OR2T3Q8NH03 318 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 ACE2Q9BYF1 805 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 TSPYL1Q9H0U9 437 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 SLC6A17Q9H1V8 727 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 PRDM16Q9HAZ2 1276 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 HS3ST2Q9Y278 367 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 GLDCP23378 1020 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 ACTN2P35609 894 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 ACVRL1P37023 503 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 ARL4AP40617 200 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 HADHBP55084 474 aaKnown RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 ACCSLQ4AC99 568 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 RETSATQ6NUM9 610 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 UMODL1-AS1Q8N2C9 162 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 NKD2Q969F2 451 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-201ENST00000260130 FAM122AQ96E09 287 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
SDCBP-201ENST00000260130 A0A0A6YYK5 440 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 H3BRJ5 948 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 ATP9BO43861 1147 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 MT-CO1P00395 513 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 ERCC2P18074 760 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 YBEYP58557 167 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 TAS2R40P59535 323 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 SIM2Q14190 667 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 C9orf64Q5T6V5 341 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 POLNQ7Z5Q5 900 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 NOL6Q9H6R4 1146 aaKnown RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 FBRSQ9HAH7 460 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 MUC22E2RYF6 1773 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 SIN3BO75182 1162 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 KRT7P08729 469 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 VAV2P52735 878 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 DLG2Q15700 870 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 ATP13A4Q4VNC1 1196 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 KIAA1324Q6UXG2 1013 aaKnown RBP17.12■□□□□ 0.33
SDCBP-201ENST00000260130 LINGO4Q6UY18 593 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 CEP68Q76N32 757 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 ATP11CQ8NB49 1132 aa17.12■□□□□ 0.33
SDCBP-201ENST00000260130 FRS2Q8WU20 508 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms