RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 UXTQ9UBK9 157 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PLXNB2O15031 1838 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CELSR3Q9NYQ7 3312 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PLXNA1Q9UIW2 1896 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 B2RBV5 119 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 E9PAM4 449 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 AIM2O14862 343 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 DCXO43602 365 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 DAB1O75553 588 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 AXLP30530 894 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SLC8A1P32418 973 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CD68P34810 354 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SLC25A3Q00325 362 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 MPP3Q13368 585 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PDE1CQ14123 709 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SLC9A4Q6AI14 798 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 MFSD5Q6N075 450 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PACS1Q6VY07 963 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 NAT16Q8N8M0 369 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SEMA3CQ99985 751 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 GDAP2Q9NXN4 497 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 FBXW11Q9UKB1 542 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 HS3ST4Q9Y661 456 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 V9GYQ6 96 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 A0A1W2PQ67 120 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SNAP91O60641 907 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 YWHAQP27348 245 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PMLP29590 882 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 TCTN1Q2MV58 587 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 TCHHL1Q5QJ38 904 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 RBM20Q5T481 1227 aaKnown RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CES4AQ5XG92 561 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 TXNDC8Q6A555 127 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 FSTL4Q6MZW2 842 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 PDZD4Q76G19 769 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 CRLF3Q8IUI8 442 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SLCO2A1Q92959 643 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 USP13Q92995 863 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 MLPHQ9BV36 600 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-201ENST00000258607 SNX15Q9NRS6 342 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
CKAP2-201ENST00000258607 C2orf78A6NCI8 922 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ALDOAP04075 364 aaKnown RBP9.25□□□□□ -0.93
CKAP2-201ENST00000258607 GSTA1P08263 222 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 GSTA2P09210 222 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 GARSP41250 739 aaKnown RBP9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PTPN9P43378 593 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CYP4F8P98187 520 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CDC42EP1Q00587 391 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CREB5Q02930 508 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PRPSAP1Q14558 356 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CNSTQ6PJW8 725 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 OR13C4Q8NGS5 318 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 AGAP11Q8TF27 550 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 IFT43Q96FT9 208 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.931e-6■■■□□ 16
CKAP2-201ENST00000258607 VRTNQ9H8Y1 702 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PLAC1Q9HBJ0 212 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 NOD2Q9HC29 1040 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CNGB3Q9NQW8 809 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 GIT1Q9Y2X7 761 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PPME1Q9Y570 386 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ARL5AQ9Y689 179 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PRR5-ARHGAP8B1AHC4 643 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 FCHO1O14526 889 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 CHADO15335 359 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 EDF1O60869 148 aaKnown RBP9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ELF1P32519 619 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ABL2P42684 1182 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ARHGAP8P85298 464 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 SEMA5AQ13591 1074 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 TCEAL1Q15170 157 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 PLA2G4EQ3MJ16 856 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 TRIM60Q495X7 471 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 STXBP5Q5T5C0 1151 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ATXN7L2Q5T6C5 722 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-201ENST00000258607 FBXL22Q6P050 247 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 FUT10Q6P4F1 479 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 STRADAQ7RTN6 431 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 MAB21L3Q8N8X9 362 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 BANPQ8N9N5 519 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 FAM156AQ8NDB6 213 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 SH3RF2Q8TEC5 729 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 HDAC10Q969S8 669 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 WBP2Q969T9 261 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 APOPT1Q96IL0 206 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 SLC22A12Q96S37 553 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 TMEM51Q9NW97 253 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 SPTBN2O15020 2390 aa9.25□□□□□ -0.93
CKAP2-201ENST00000258607 WDR90Q96KV7 1748 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms