RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SPATA31D4Q6ZUB0 917 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 B3GALNT2Q8NCR0 500 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 CALML6Q8TD86 181 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 LINC01599Q8WXQ3 324 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 TSPAN17Q96FV3 270 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 PCED1BQ96HM7 432 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 FSD1LQ9BXM9 530 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 AP4E1Q9UPM8 1137 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 PCDHA11Q9Y5I1 949 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 A6NHS1 94 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 AURKAO14965 403 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 TBX10O75333 385 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 AXLP30530 894 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 VASPP50552 380 aaPredicted RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 NSUN2Q08J23 767 aaKnown RBP eCLIP9.36□□□□□ -0.91
RPA1-201ENST00000254719 ADIGQ0VDE8 80 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 MAPRE1Q15691 268 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 UPP1Q16831 310 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 C17orf99Q6UX52 265 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 GSDMBQ8TAX9 411 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 TFB1MQ8WVM0 346 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 PGBD4Q96DM1 585 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 VWCEQ96DN2 955 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 CCDC97Q96F63 343 aaPredicted RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 HAUS8Q9BT25 410 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SLC13A1Q9BZW2 595 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SAR1AQ9NR31 198 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 TMEM216Q9P0N5 145 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 DCDC2Q9UHG0 476 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 C9IYK1 514 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 CREB3O43889 395 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 MYL3P08590 195 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 GRK2P25098 689 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 RPS6KA3P51812 740 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 GJA9P57773 515 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 MRPS35P82673 323 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 GPR162Q16538 588 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 NAPEPLDQ6IQ20 393 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 B4GALNT2Q8NHY0 566 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 LPPQ93052 612 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SDCCAG3Q96C92 435 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 DUSP16Q9BY84 665 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 EML4Q9HC35 981 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 HACD1B0YJ81 288 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 STRNO43815 780 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 LCP1P13796 627 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 CRHR1P34998 444 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 GNL1P36915 607 aaPredicted RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 VWA5B1Q5TIE3 1220 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PM20D1Q6GTS8 502 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 GDF6Q6KF10 455 aaPredicted RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 DENND5BQ6ZUT9 1274 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 UNC93AQ86WB7 457 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 SNRNP27Q8WVK2 155 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 FAM161BQ96MY7 647 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TMEM120AQ9BXJ8 343 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TRIM4Q9C037 500 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TRIM49D1C9J1S8 452 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 PROCP04070 461 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PTPN3P26045 913 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PRKAA2P54646 552 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 ESRRGP62508 458 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 FBXO47Q5MNV8 452 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 STRADAQ7RTN6 431 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 DNAJC1Q96KC8 554 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 HEY2Q9UBP5 337 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 COL6A3P12111 3177 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 WFS1O76024 890 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 LTFP02788 710 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 BPGMP07738 259 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 MMP2P08253 660 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PSMB4P28070 264 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PEX6Q13608 980 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 PGM2L1Q6PCE3 622 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 MARK2Q7KZI7 788 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 SLC25A41Q8N5S1 370 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PPHLN1Q8NEY8 458 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 PIN4Q9Y237 131 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 EEF2KO00418 725 aaKnown RBP9.35□□□□□ -0.91
RPA1-201ENST00000254719 USP12O75317 370 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 CALB2P22676 271 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 DSC3Q14574 896 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 FAM110CQ1W6H9 321 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 C11orf91Q3C1V1 193 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TBC1D25Q3MII6 688 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 NDUFAF2Q8N183 169 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 INPP5DQ92835 1189 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 TADA1Q96BN2 335 aa9.35□□□□□ -0.91
RPA1-201ENST00000254719 C7orf26Q96N11 449 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms