RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 MEIS2O14770 477 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TLL1O43897 1013 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SSTR1P30872 391 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 NUP62P37198 522 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 IFNGR2P38484 337 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CDK7P50613 346 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CASP5P51878 434 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 CORO7P57737 925 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 IL2P60568 153 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SPDYCQ5MJ68 293 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 KNDC1Q76NI1 1749 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ANKRD23Q86SG2 305 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 OR52K1Q8NGK4 314 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ATXN2LQ8WWM7 1075 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 SEPHS2Q99611 448 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SH3GL3Q99963 347 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 UGT2B28Q9BY64 529 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SEMA4AQ9H3S1 761 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TAS2R14Q9NYV8 317 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SAE1Q9UBE0 346 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 SNX6Q9UNH7 406 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 A0A0A0MRY4 1105 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 RGS5O15539 181 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 PEX1O43933 1283 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 PARNO95453 639 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 HSMCR30P0CW71 290 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 ATP6V1C1P21283 382 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FASP25445 335 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 RHBDL3P58872 404 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 UGCGQ16739 394 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FGD3Q5JSP0 725 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 HYIQ5T013 277 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ALLCQ8N6M5 410 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MTERF3Q96E29 417 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 SPATA13Q96N96 652 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 QRFPRQ96P65 431 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MRPL45Q9BRJ2 306 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 FUCA2Q9BTY2 467 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FUT8Q9BYC5 575 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TRIT1Q9H3H1 467 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 L2HGDHQ9H9P8 463 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FBXO6Q9NRD1 293 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 ADAM28Q9UKQ2 775 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 DERAQ9Y315 318 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 KPNA5O15131 536 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FKBP6O75344 327 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ATG7O95352 703 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 FTH1P02794 183 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 ADH1AP07327 375 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CSH1P0DML2 217 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CSH2P0DML3 217 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 NEK3P51956 506 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 THOP1P52888 689 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 GALNT3Q14435 633 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TSNQ15631 228 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 PSMD5Q16401 504 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TRIM71Q2Q1W2 868 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 STXBP5Q5T5C0 1151 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MARK2Q7KZI7 788 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 VSIG10LQ86VR7 867 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 METTL6Q8TCB7 284 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 BTBD10Q9BSF8 475 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 OSBPL6Q9BZF3 934 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CDT1Q9H211 546 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 LRRC4BQ9NT99 713 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 KCNK1O00180 336 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CLDN5O00501 218 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TRIM13O60858 407 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 PPP3CAQ08209 521 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 CNGA2Q16280 664 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 KYAT3Q6YP21 454 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 TOP6BLQ8N6T0 577 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 UTP15Q8TED0 518 aaKnown RBP8.83□□□□□ -1
PTCD3-201ENST00000254630 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.83□□□□□ -1
PTCD3-201ENST00000254630 STMN3Q9NZ72 180 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 HES2Q9Y543 173 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 NR2E3Q9Y5X4 410 aa8.83□□□□□ -1
PTCD3-201ENST00000254630 LIASO43766 372 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 CCNB1P14635 433 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ATP4AP20648 1035 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 GRM5P41594 1212 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 OASLQ15646 514 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 IL17AQ16552 155 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 PLPP4Q5VZY2 271 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 GDPD5Q8WTR4 605 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ALG9Q9H6U8 611 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 TNPO3Q9Y5L0 923 aaKnown RBP8.82□□□□□ -1
PTCD3-201ENST00000254630 SLC28A1O00337 649 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 HS6ST1O60243 411 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 ASGR1P07306 291 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 UMPSP11172 480 aa8.82□□□□□ -1
PTCD3-201ENST00000254630 AMD1P17707 334 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms