RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SLITRK3O94933 977 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 SKIV2L2P42285 1042 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 PRKCQQ04759 706 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 FAM98BQ52LJ0 330 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 ZBTB8BQ8NAP8 495 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 ITM2CQ9NQX7 267 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 KLQ9UEF7 1012 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TARBP1Q13395 1621 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 KPNA1P52294 538 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 PODNQ7Z5L7 613 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 PGBD3Q8N328 593 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 HTR3CQ8WXA8 447 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ZFP42Q96MM3 310 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 GFM1Q96RP9 751 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 HGH1Q9BTY7 390 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ICAM3P32942 547 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TKTL1P51854 596 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RAPSNQ13702 412 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 SLC9A4Q6AI14 798 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RTKN2Q8IZC4 609 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 OR52K2Q8NGK3 314 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TMEM176AQ96HP8 235 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 KLHL32Q96NJ5 620 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 AMHP03971 560 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 MYBPC2Q14324 1141 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 SLC45A4Q5BKX6 768 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 FASTKD5Q7L8L6 764 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 EID3Q8N140 333 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ASS1P00966 412 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 CD48P09326 243 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 NFKB1P19838 968 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TAF6P49848 677 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 OTOP3Q7RTS5 596 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 QKIQ96PU8 341 aaKnown RBP eCLIP7.62□□□□□ -1.198e-12■■■■■ 36.7
RIF1-201ENST00000243326 PCDHGA3Q9Y5H0 932 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 CCDC182A6NF36 153 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 NOS1APO75052 506 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 NFICP08651 508 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ATG10Q9H0Y0 220 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 PRKAG3Q9UGI9 489 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 DDX3YO15523 660 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 EN1Q05925 392 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 SPANXN2Q5MJ10 180 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 NT5DC1Q5TFE4 455 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 IRF2BP2Q7Z5L9 587 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ZNF605Q86T29 641 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 CATSPERBQ9H7T0 1116 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 AVENQ9NQS1 362 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 GNEQ9Y223 722 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 FAM25EA8MYX2 175 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ABL2P42684 1182 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 CAPZA2P47755 286 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 CD151P48509 253 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RAB25P57735 213 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 PTPN11Q06124 597 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 CLEC6AQ6EIG7 209 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 DAGLBQ8NCG7 672 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 EFCAB10A6NFE3 127 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 E7ENX8 843 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 GLP2RO95838 553 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RGS4P49798 205 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RNF44Q7L0R7 432 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 SLC2A14Q8TDB8 520 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TRIM45Q9H8W5 580 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 SH3D21A4FU49 640 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 FGFR1P11362 822 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 HMGB2P26583 209 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 AP3M2P53677 418 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 MAMLD1Q13495 774 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ANKRD23Q86SG2 305 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 VPS33AQ96AX1 596 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 LRRC4CQ9HCJ2 640 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 DDX4Q9NQI0 724 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 CACNG4Q9UBN1 327 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 KIAA1210Q9ULL0 1709 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 CTPS1P17812 591 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 IL12AP29459 219 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 MAN2A2P49641 1150 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 LRRC49Q8IUZ0 686 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 SAR1AQ9NR31 198 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 BTBD3Q9Y2F9 522 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 PXDNLA1KZ92 1463 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 UMODL1Q5DID0 1318 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CCRL2O00421 344 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TPST2O60704 377 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 EDF1O60869 148 aaKnown RBP7.61□□□□□ -1.19
RIF1-201ENST00000243326 TOMM70O94826 608 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 TSPAN19P0C672 248 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 SLC7A2P52569 658 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 DSG4Q86SJ6 1040 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CDYL2Q8N8U2 506 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 PGM2Q96G03 612 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 HBEGFQ99075 208 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 CLPBQ9H078 707 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 ZFYVE28Q9HCC9 887 aa7.61□□□□□ -1.19
RIF1-201ENST00000243326 KCNK4Q9NYG8 393 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms