RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ATAD3CQ5T2N8 411 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 IRAK1BP1Q5VVH5 260 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 CRTC3Q6UUV7 619 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 CBR4Q8N4T8 237 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 OR5H6Q8NGV6 325 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 FBXL20Q96IG2 436 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SEPT10Q9P0V9 454 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 KIAA1551Q9HCM1 1747 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 AVILO75366 819 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 VAPBO95292 243 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 GH2P01242 217 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 RBL1P28749 1068 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 YAP1P46937 504 aaKnown RBP13.23□□□□□ -0.29
MSH2-201ENST00000233146 TNNI2P48788 182 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 PAGE2BQ5JRK9 111 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 CCNJQ5T5M9 372 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 PRR23BQ6ZRT6 265 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 MTMR12Q9C0I1 747 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
MSH2-201ENST00000233146 A0A0G2JMP0 313 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 RAD51BO15315 384 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 PAPSS1O43252 624 aaPredicted RBP13.22□□□□□ -0.29
MSH2-201ENST00000233146 RPL22P35268 128 aaKnown RBP13.22□□□□□ -0.29
MSH2-201ENST00000233146 CETN1Q12798 172 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 RINT1Q6NUQ1 792 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 LLGL2Q6P1M3 1020 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 GALNT12Q8IXK2 581 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 CLYBLQ8N0X4 340 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 OR6Q1Q8NGQ2 317 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 SEPT8Q92599 483 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 OMA1Q96E52 524 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 EMCNQ9ULC0 261 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 HMX2A2RU54 273 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 H3BUI4 141 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
MSH2-201ENST00000233146 ASNSP08243 561 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 UNGP13051 313 aaPredicted RBP13.22□□□□□ -0.29
MSH2-201ENST00000233146 SPNP16150 400 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 ARNTP27540 789 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 PSMD8P48556 350 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 PPP5CP53041 499 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 GDF10P55107 478 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 CABP4P57796 275 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 AGPAT3Q9NRZ7 376 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 TBC1D22BQ9NU19 505 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 SLCO3A1Q9UIG8 710 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
MSH2-201ENST00000233146 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 A0A0X1KG70 313 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 SYNCRIPO60506 623 aaKnown RBP13.21□□□□□ -0.29
MSH2-201ENST00000233146 GRIA1P42261 906 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 SLC9A3P48764 834 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 ABCE1P61221 599 aaKnown RBP13.21□□□□□ -0.29
MSH2-201ENST00000233146 POU6F2P78424 691 aaPredicted RBP13.21□□□□□ -0.29
MSH2-201ENST00000233146 TNFAIP2Q03169 654 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 PPP3CAQ08209 521 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 TARDBPQ13148 414 aaKnown RBP eCLIP13.21□□□□□ -0.29
MSH2-201ENST00000233146 AGAP6Q5VW22 663 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 OFCC1Q8IZS5 231 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 PIK3C3Q8NEB9 887 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 OR2T3Q8NH03 318 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 AGAP4Q96P64 663 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 OR52B2Q96RD2 323 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 FUNDC2Q9BWH2 189 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 PCDHAC1Q9H158 963 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 MOCS1Q9NZB8 636 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
MSH2-201ENST00000233146 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 MEIS1O00470 390 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 ABCB7O75027 752 aa13.21□□□□□ -0.29
MSH2-201ENST00000233146 TIPRLO75663 272 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms