RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 OCEL1Q9H607 264 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 DCDC2Q9UHG0 476 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 STAP1Q9ULZ2 295 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 CRYL1Q9Y2S2 319 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 B3GAT3O94766 335 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 LRIG2O94898 1065 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 RTN3O95197 1032 aaPredicted RBP15.35■□□□□ 0.05
EFNB1-201ENST00000204961 GSTT1P30711 240 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 CPOXP36551 454 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 CCNG1P51959 295 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 PRAMEP78395 509 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 FLOT2Q14254 428 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF789Q5FWF6 425 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 OR52E8Q6IFG1 317 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 AMIGO2Q86SJ2 522 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 OR9I1Q8NGQ6 314 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 PCED1BQ96HM7 432 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 SENP8Q96LD8 212 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 UBQLN1Q9UMX0 589 aaKnown RBP15.35■□□□□ 0.05
EFNB1-201ENST00000204961 IPPQ9Y573 584 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 MAGEA13PA6NCF6 341 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
EFNB1-201ENST00000204961 FAM200BP0CF97 657 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 PKDCCQ504Y2 493 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 LRRC8BQ6P9F7 803 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 BHLHE22Q8NFJ8 381 aaPredicted RBP15.35■□□□□ 0.05
EFNB1-201ENST00000204961 MLPHQ9BV36 600 aaPredicted RBP15.35■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF212Q9UDV6 495 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF180Q9UJW8 692 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 PTPRFP10586 1907 aa15.35■□□□□ 0.05
EFNB1-201ENST00000204961 A0A0U1RQS6 177 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 XPO1O14980 1071 aaKnown RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 TRIM13O60858 407 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 GJB3O75712 270 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 MMP3P08254 477 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 NPR3P17342 541 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 MCCD1P59942 119 aaPredicted RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 PPP1R3AQ16821 1122 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 SH2D4BQ5SQS7 431 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 ZNF470Q6ECI4 717 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 CLEC6AQ6EIG7 209 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 NET1Q7Z628 596 aaPredicted RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 WNT8BQ93098 351 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 GRIP2Q9C0E4 1043 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 PTGDR2Q9Y5Y4 395 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 RLFQ13129 1914 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 MT-ND1P03886 318 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 SPATA31D3P0C874 917 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 ZFXP17010 805 aaPredicted RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 CES1P23141 567 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 CD68P34810 354 aaPredicted RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 SLC12A2P55011 1212 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 SCIMPQ6UWF3 145 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 KYAT3Q6YP21 454 aaKnown RBP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 SPATA31D4Q6ZUB0 917 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 EXOC8Q8IYI6 725 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
EFNB1-201ENST00000204961 LRRC40Q9H9A6 602 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 CRTAC1Q9NQ79 661 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 MIOSQ9NXC5 875 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 CROCCQ5TZA2 2017 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
EFNB1-201ENST00000204961 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.33■□□□□ 0.05
EFNB1-201ENST00000204961 TUBB3Q13509 450 aa15.33■□□□□ 0.05
EFNB1-201ENST00000204961 PSTKQ8IV42 348 aaKnown RBP15.33■□□□□ 0.05
EFNB1-201ENST00000204961 CEP97Q8IW35 865 aa15.33■□□□□ 0.05
EFNB1-201ENST00000204961 FSTL5Q8N475 847 aaPredicted RBP15.33■□□□□ 0.05
EFNB1-201ENST00000204961 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.05
EFNB1-201ENST00000204961 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.05
EFNB1-201ENST00000204961 FETUBQ9UGM5 382 aa15.33■□□□□ 0.05
EFNB1-201ENST00000204961 AHSGP02765 367 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 PIK3R1P27986 724 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 MS4A2Q01362 244 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 ENPEPQ07075 957 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 SLC12A1Q13621 1099 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 SNX17Q15036 470 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 PAQR9Q6ZVX9 377 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 LRGUKQ96M69 825 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 PRPF18Q99633 342 aaKnown RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 FSD1LQ9BXM9 530 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 ILKAPQ9H0C8 392 aaPredicted RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 FBRSL1Q9HCM7 1045 aaKnown RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 KIAA1257Q9ULG3 409 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 ARHGAP26Q9UNA1 814 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 HEMK1Q9Y5R4 338 aaPredicted RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 KCNU1A8MYU2 1149 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 HNRNPCL1O60812 293 aaKnown RBP15.33■□□□□ 0.04
EFNB1-201ENST00000204961 SOAT2O75908 522 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 KLHL2O95198 593 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 TFEBP19484 476 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 TPSB2P20231 275 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 PMLP29590 882 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 FDFT1P37268 417 aa15.33■□□□□ 0.04
EFNB1-201ENST00000204961 SLC26A2P50443 739 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms