RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Prr18Q6PAN7 307 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Cfap97Q6ZPR1 541 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Slc16a9Q7TM99 508 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr293Q7TS10 336 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zfp398Q8BV16 643 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tlk1Q8C0V0 766 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Pnpla8Q8K1N1 776 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ppp4r1Q8K2V1 951 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 HibchQ8QZS1 385 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Snx15Q91WE1 337 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Bag2Q91YN9 210 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gprc5bQ923Z0 410 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sytl2Q99N50 950 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Nudt8Q9CR24 210 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ilf2Q9CXY6 390 aaKnown RBP13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Trim42Q9D2H5 723 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Agpat3Q9D517 376 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 TcimQ9D915 106 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Rab13Q9DD03 202 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 C1qtnf1Q9QXP7 281 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ap4b1Q9WV76 738 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Slfn2Q9Z0I6 378 aa13.58□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ms4a4aA0A087WRT7 236 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zfp626A0A0U1RQ84 676 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr1160A2AVT0 319 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Pate1E9Q658 125 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Kifc3O35231 824 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 BpgmP15327 259 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tsta3P23591 321 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Cd9P40240 226 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Csrp3P50462 194 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gp1bbP56400 206 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ythdf1P59326 559 aaKnown RBP13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 KrtdapQ3V2T4 102 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tmem65Q4VAE3 234 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lcp1Q61233 627 aaKnown RBP13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 PtprjQ64455 1238 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Crtc1Q68ED7 630 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Fnip1Q68FD7 1165 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lingo3Q6GQU6 589 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Arhgap20Q6IFT4 1182 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr412Q7TRW7 312 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sytl5Q80T23 753 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Prkaa2Q8BRK8 552 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Clptm1lQ8BXA5 539 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Slco6c1Q8C0X7 706 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Robo4Q8C310 1012 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ClmnQ8C5W0 1052 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Acsl5Q8JZR0 683 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Arhgap18Q8K0Q5 663 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tbc1d22aQ8R5A6 516 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Asz1Q8VD46 475 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Olfr1352Q8VGX5 309 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sult5a1Q91X36 291 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tmem135Q9CYV5 458 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ovca2Q9D7E3 225 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 RhojQ9ER71 214 aa13.57□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Osbpl8B9EJ86 889 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Gm3259D3YUK0 475 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Vmn2r103E9PWW0 856 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Slc9a3G3X939 829 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Nrg3O35181 713 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Exoc7O35250 697 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ring1O35730 406 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Limk2O54785 638 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sbk3P0C5K0 361 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Mcpt1P11034 246 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ChgbP16014 677 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 GlrbP48168 496 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Lhx3P50481 400 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Tbc1d10aP58802 500 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Sap25Q1EHW4 186 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ppp1r13lQ5I1X5 824 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Heatr9Q5QNV8 569 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 ChukQ60680 745 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Msi1Q61474 362 aaKnown RBP13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ppp1r12bQ8BG95 976 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Slc18a2Q8BRU6 517 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Csnk1g3Q8C4X2 424 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Abi1Q8CBW3 481 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Trim68Q8K243 485 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Igsf8Q8R366 611 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Mrpl9Q99N94 265 aaKnown RBP13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Rwdd4Q9CPR1 188 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Nsmce3Q9CPR8 279 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Mrpl57Q9CQF8 102 aaKnown RBP13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 4930524N10RikQ9D519 233 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Rin2Q9D684 903 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Rsrc1Q9DBU6 334 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Wfdc1Q9ESH5 211 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Homer2Q9QWW1 354 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Atp11cQ9QZW0 1129 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Ap1m2Q9WVP1 423 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Zfp985A2A7A5 519 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Arhgef26D3YYY8 869 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Trim12cD3Z3L3 497 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Chrna4O70174 629 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 GnazO70443 355 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Fam167bP17257 162 aa13.56□□□□□ -0.24
Pdlim5-208ENSMUST00000196220 Flt3lgP49772 232 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms