RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Nr0b1Q61066 472 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Naaladl1Q7M758 745 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 GmppbQ8BTZ7 360 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Fbxo21Q8VDH1 627 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ino80bQ99PT3 375 aaKnown RBP11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ndel1Q9ERR1 345 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Psma4Q9R1P0 261 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ptpn4Q9WU22 926 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Slfn14V9GXG1 899 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm281D3Z1Y0 860 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Hs3st1O35310 311 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Klrk1O54709 232 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 AprtP08030 180 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 RxraP28700 467 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Psmb4P99026 264 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Cd36Q08857 472 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Q8VDP2 222 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Myh11O08638 1972 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mup13L7N222 235 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zbtb14Q08376 449 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gsdmc2Q2KHK6 480 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Q3UE31 404 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zyg11bQ3UFS0 744 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Larp4bQ6A0A2 741 aaKnown RBP11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 GnasQ6R0H7 1133 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Lrrc75bQ7TPD7 306 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Pcdh19Q80TF3 1145 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 AW551984Q8BGF0 804 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 TiprlQ8BH58 271 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ssh3Q8K330 649 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Lrrc40Q9CRC8 602 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ggt5Q9Z2A9 573 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Gm8011K7N6Y5 207 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Trdmt1O55055 415 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mmp3P28862 477 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 LipeP54310 759 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Polr2lP62876 67 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Adcy6Q01341 1165 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Arl14Q3SXC5 192 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Scarf1Q5ND28 820 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Slc10a5Q5PT54 434 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rap1gap2Q5SVL6 712 aaKnown RBP11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Dnajc1Q61712 552 aaKnown RBP11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zc4h2Q68FG0 224 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Samd7Q8C8Y5 445 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Znhit2Q9QY66 399 aa11.22□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Grik3B1AS29 919 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Cyp2b23E9Q593 491 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 LtfP08071 707 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Morf4l1P60762 362 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Aldh16a1Q571I9 802 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Ptger2Q62053 362 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Msantd2Q6NZR2 559 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rasal3Q8C2K5 1041 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mtrf1Q8K126 446 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Q91Z58 1206 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Bscl2Q9Z2E9 383 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Sf3b1Q99NB9 1304 aaKnown RBP11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Mon2Q80TL7 1715 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vmn2r38G3UYA8 861 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vmn2r33K7N705 861 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Vmn2r44L7N2E1 861 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rpl22P67984 128 aaKnown RBP11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Rbm44Q3V089 1013 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Prkaa2Q8BRK8 552 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 N4bp2l2Q8JZS6 575 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Slc12a9Q99MR3 914 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Piwil1Q9JMB7 862 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 CtcflA2APF3 636 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zscan5bB2RTN3 468 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Smok3aC0HKC8 504 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Smok3bC0HKC9 504 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Nckap1P28660 1128 aaKnown RBP11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Sox6P40645 827 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Col6a2Q02788 1034 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Cab39Q06138 341 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Tssk1bQ61241 365 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Pcid2Q8BFV2 399 aaKnown RBP11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Zfp263Q8CF60 680 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Snx8Q8CFD4 459 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Sars2Q9JJL8 518 aa11.21□□□□□ -0.61
Scn8a-203ENSMUST00000108908 Folh1O35409 752 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Igf2bp1O88477 577 aaKnown RBP11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Hoxc6P10629 235 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Lipo3Q3UT41 399 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Sh2d1b2Q45HK4 132 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Ca4Q64444 305 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Mbtd1Q6P5G3 631 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Defb34Q7TNV8 81 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Arhgef38Q80VK6 770 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Agbl2Q8CDK2 862 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Gm42417Q8K1D0 126 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 TfgQ9Z1A1 397 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Cdk14O35495 469 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Pknox1O70477 436 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Ccnb1P24860 430 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Ctps1P70698 591 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Clec12aQ504P2 267 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Q8BH50 245 aa11.21□□□□□ -0.62
Scn8a-203ENSMUST00000108908 Fam187aQ9D3R5 417 aa11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms