RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Vmn2r11E9Q4X4 861 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Serpine3E9Q6A2 401 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cyp2j12G3UXT0 502 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 TpteG5E8H5 664 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm2897K7N6T7 172 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr603L7N1Y4 312 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Sptlc1O35704 473 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pknox1O70477 436 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Rps6ka3P18654 740 aaKnown RBP13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mmp3P28862 477 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Stat5aP42230 793 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cd36Q08857 472 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cyb5r2Q3KNK3 276 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Adrbk2Q3UYH7 688 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mthfd1lQ3V3R1 977 aaKnown RBP13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tll1Q62381 1013 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Kctd12Q6WVG3 327 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Catsper3Q80W99 395 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Eif4bQ8BGD9 611 aaKnown RBP13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 EmsyQ8BMB0 1264 aaKnown RBP13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Lig4Q8BTF7 911 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm3411Q8C7R2 150 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pcdhb7Q8CDY9 829 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nudt13Q8JZU0 352 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 HpdlQ8K248 371 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 LipmQ8K2A6 422 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Nsmce2Q91VT1 247 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 GldcQ91W43 1025 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Pcdhgb1Q91XX8 918 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 KlbQ99N32 1043 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 CenpsQ9D084 142 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Clic3Q9D7P7 237 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tsga13Q9DA17 273 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 RhojQ9ER71 214 aa13.13□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ttll11A4Q9F4 727 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 A930018M24RikB7ZMY3 218 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Kdelc2G5E897 503 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 AldoaP05064 364 aaKnown RBP13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Slc6a13P31649 602 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 FynP39688 537 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 AdslP54822 484 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 NxnP97346 435 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfm4Q3UZZ4 505 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Scn2bQ56A07 215 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Lrrc8bQ5DU41 803 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 StyxQ60969 223 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ptpn14Q62130 1189 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ntan1Q64311 310 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gpsm1Q6IR34 673 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr798Q7TRH8 311 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Disc1Q811T9 852 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmem198Q8BG75 360 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cwf19l2Q8BG79 887 aaKnown RBP13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 VcpkmtQ8C436 228 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Adamts2Q8C9W3 1213 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Rftn2Q8CHX7 500 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 HnmtQ91VF2 295 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Traf7Q922B6 594 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Lysmd3Q99LE3 305 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 GarsQ9CZD3 729 aaKnown RBP13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Kctd4Q9D7X1 259 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Chmp2aQ9DB34 222 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Extl1Q9JKV7 669 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Dnaja2Q9QYJ0 412 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ap4b1Q9WV76 738 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Il18rapQ9Z2B1 614 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ank3G5E8K5 1961 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Klhdc7bA0A286YD60 1263 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zfp963D3Z2T8 383 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 B020004C17RikJ3QP07 232 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Sypl2O89104 264 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 P01641 117 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 P01670 111 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 P01671 111 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 P01672 111 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ap2a2P17427 938 aaKnown RBP13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 HalP35492 657 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mgat3Q10470 538 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 P3h1Q3V1T4 739 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Fads6Q80UG1 342 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 TdrkhQ80VL1 560 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cdkn2aipQ8BI72 563 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Bhlhe22Q8C6A8 355 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Mrpl47Q8K2Y7 252 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ssx2ipQ8VC66 615 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zfp617Q91WM0 559 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Atp6v1b1Q91YH6 513 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Zfp64Q99KE8 643 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Ssxb1Q9CPU1 170 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Tmem114Q9D563 222 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 1700080O16RikQ9D9G4 284 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Paqr5Q9DCU0 330 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Jph2Q9ET78 696 aa13.12□□□□□ -0.31
Nup88-203ENSMUST00000108531 Vmn2r121A2BE32 847 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 ZxdbA2CE44 873 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 Olfr292F8VQ84 308 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm6408J3QNG1 320 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 Gm3402K7N5P2 326 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 Vmn2r1O70410 912 aa13.11□□□□□ -0.31
Nup88-203ENSMUST00000108531 Cbx2P30658 519 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms