RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Fam171a1A2ATK9 892 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 1600015I10RikE9Q745 711 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm20509G3UZF1 325 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Vmn2r1O70410 912 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mtnd2P03893 345 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Glt8d2Q640P4 349 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Psmd11Q8BG32 422 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hdac7Q8C2B3 938 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mettl21eQ8CDZ2 244 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ssh3Q8K330 649 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nos1apQ9D3A8 503 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ap3m1Q9JKC8 418 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tecpr2Q3UH45 1423 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Npy5rO70342 466 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PlaaP27612 794 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nos2P29477 1144 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PklrP53657 574 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cdh8P97291 799 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Adra1dP97714 562 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Bbs1Q3V3N7 593 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 SgtaQ8BJU0 315 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr589Q8VGV8 317 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gmcl1Q920G9 524 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Use1Q9CQ56 270 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mtfr1lQ9CWE0 289 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dhx34Q9DBV3 1145 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Crb1Q8VHS2 1405 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rreb1Q3UH06 1700 aaKnown RBP14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Trmt1lA2RSY6 728 aaKnown RBP14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hipk1O88904 1210 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 RogdiQ3TDK6 287 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyp2c29Q64458 490 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 DgkgQ91WG7 788 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Prkar1aQ9DBC7 381 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mapk9Q9WTU6 423 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gria4Q9Z2W8 902 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slfn8B1ARD8 910 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc16a6B1AT66 607 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gsta1P13745 223 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 HmbsP22907 361 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Msx2Q03358 267 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ptger2Q62053 362 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gsta1Q6P8Q0 223 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr1302Q8VGE9 315 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Asb11Q9CQ31 323 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Osbpl3Q9DBS9 855 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PignQ9R1S3 931 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 CcniQ9Z2V9 377 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Klhl4B1AZR0 717 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Abhd12bG3UZN6 359 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Klhl23Q6GQU2 558 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc39a14Q75N73 489 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 TiprlQ8BH58 271 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Lin7aQ8JZS0 233 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Snx15Q91WE1 337 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mcm8Q9CWV1 833 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Prdm5Q9CXE0 599 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Inpp4aQ9EPW0 939 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 XkQ9QXY7 446 aa14.16□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Umodl1Q5DID3 1319 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tmem245B1AZA5 876 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Fbrsl1E9Q9T0 1031 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rgsl1H3BL40 1073 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dennd5aQ6PAL8 1287 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Usp20Q8C6M1 916 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rpp40Q8R1F9 363 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Angel1Q8VCU0 667 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Exosc4Q921I9 245 aaKnown RBP14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Chid1Q922Q9 393 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rex1bdQ9CYZ6 169 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Efhc1Q9D9T8 648 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 H2afb2S4R1M3 115 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm5737A0A140LI11 423 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ssxb8B1AY40 170 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc17a7Q3TXX4 560 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ttc9Q3V038 219 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Castor2Q8CAB8 329 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Q9CPS8 106 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rec114Q9CWH4 259 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 GarsQ9CZD3 729 aaKnown RBP14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Serpinb1aQ9D154 379 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ubiad1Q9DC60 336 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nusap1Q9ERH4 427 aaKnown RBP14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Akap12Q9WTQ5 1684 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 DgkhD3YXJ0 1156 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Psmd7P26516 321 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ddr1Q03146 911 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ptcd3Q14C51 685 aaKnown RBP14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mxd4Q60948 209 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr798Q7TRH8 311 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr23Q7TRX4 325 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Eif3mQ99JX4 374 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rassf3Q99P51 232 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dus2Q9D7B1 493 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Trpc4apQ9JLV2 797 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hes2O54792 157 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Shmt1P50431 478 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 1700061G19RikQ08EE8 705 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Brinp3Q499E0 766 aa14.15□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr389Q7TRX7 312 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms