RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Tyw3Q8BSA9 257 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Stx16Q8BVI5 326 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ago3Q8CJF9 860 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 NeproQ8R2U2 564 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Unc93b1Q8VCW4 598 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 LiasQ99M04 373 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Q9D979 236 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Il17rbQ9JIP3 499 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Tdp2Q9JJX7 370 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Zbtb12Q9Z150 459 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gria4Q9Z2W8 902 aa16.29■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Rabgap1lA6H6A9 815 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm12800B1AUV4 484 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm12794L7MTS5 483 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Aldh3a1P47739 453 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Aqp4P55088 323 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Bop1P97452 732 aaKnown RBP16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Trim71Q1PSW8 855 aaKnown RBP16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 XiapQ60989 496 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Zfp90Q61967 636 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm5414Q6IFZ8 552 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Nipal1Q8BMW7 416 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Pwp2Q8BU03 919 aaKnown RBP16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Trerf1Q8BXJ2 1205 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Tcf7l2Q924A0 459 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Tubd1Q9R1K7 455 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ank3G5E8K5 1961 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Fibcd1A2AV25 459 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm6408J3QNG1 320 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm3402K7N5P2 326 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Pknox1O70477 436 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Cd72P21855 354 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Pex2P55098 305 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Dsc2P55292 902 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Hsdl2Q2TPA8 490 aaKnown RBP16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Pramel7Q810Y8 479 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Clptm1lQ8BXA5 539 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Creld1Q91XD7 420 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Tfap2dQ91ZK0 452 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ecrg4Q99LS0 148 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Utp11Q9CZJ1 253 aaKnown RBP16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ing2Q9ESK4 281 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Cyp3a41aQ9JMA7 504 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Hey2Q9QUS4 339 aa16.28■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Trbv4A0A075B5I2 113 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Zfp963D3Z2T8 383 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gm21293E9Q4G9 266 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Sbk3P0C5K0 361 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Apobec1P51908 229 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Dnajc6Q80TZ3 938 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Kcnv1Q8BZN2 503 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Sh3kbp1Q8R550 709 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Caap1Q8VDY9 356 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Olfr809Q8VEX8 328 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ap4b1Q9WV76 738 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Zbed6D2EAC2 980 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Olfr603L7N1Y4 312 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Adam19O35674 920 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gabpb1Q00420 383 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Mc1rQ01727 315 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Ak8Q32M07 479 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Smarcd1Q61466 515 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Slc39a14Q75N73 489 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Gtf3c4Q8BMQ2 817 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Wdr11Q8K1X1 1223 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Timd2Q8R183 305 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Tbc1d22aQ8R5A6 516 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Olfr1352Q8VGX5 309 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Mtif2Q91YJ5 727 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Psip1Q99JF8 528 aaKnown RBP16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Nde1Q9CZA6 344 aa16.27■□□□□ 0.2
Ckap4-201ENSMUST00000053871 Casp8ap2Q9WUF3 1962 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 ThadaA8C756 1938 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 LctF8VPT3 1931 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Olfr1049A2ARZ0 308 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Akap5D3YVF0 745 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Mkrn2osD3Z393 217 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Vmn2r17E9PYF5 849 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 AmacrO09174 381 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Ctbp1O88712 441 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Scd1P13516 355 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Itga11P61622 1188 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Ldb1P70662 411 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Gsdmc2Q2KHK6 480 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Ubtfl1Q3USZ2 394 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Proser1Q5PRE5 913 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Dnajc1Q61712 552 aaKnown RBP16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Sh3gl3Q62421 347 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Lrfn2Q80TG9 788 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Gprc5aQ8BHL4 356 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 4933402J07RikQ8BHX0 270 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Slc7a4Q8BLQ7 635 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Gsdmc3Q8CB12 480 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Ppp6r2Q8R3Q2 923 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Zfp617Q91WM0 559 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 P2yr13Q9D8I2 337 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Asah2Q9JHE3 756 aa16.27■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Kctd18E0CZ26 429 aa16.26■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Gm8257E9Q8R3 264 aa16.26■□□□□ 0.19
Ckap4-201ENSMUST00000053871 Akain1G3UWD5 69 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms