RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Clip4Q8CI96 704 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Vmn1r199Q8R280 367 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Zfp617Q91WM0 559 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tmco1Q921L3 188 aaKnown RBP16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Reep3Q99KK1 254 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Polr3eQ9CZT4 710 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Rsph3bQ9DA80 389 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Dcaf6Q9DC22 876 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Hmgn3Q9DCB1 99 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Jph2Q9ET78 696 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Asap1Q9QWY8 1147 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Atp11cQ9QZW0 1129 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gria4Q9Z2W8 902 aa16.38■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Olfr603L7N1Y4 312 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Mllt10O54826 1068 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ap2a2P17427 938 aaKnown RBP16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Atxn10P28658 475 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Traf6P70196 530 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Serpina5P70458 405 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Glp2rQ5IXF8 512 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Fbxw11Q5SRY7 542 aaKnown RBP16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Fbxw2Q60584 422 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tbc1d12Q6A039 696 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ip6k1Q6PD10 433 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Olfr389Q7TRX7 312 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tdrd7Q8K1H1 1086 aaKnown RBP16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Pth2rQ91V95 546 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Pcdhb17Q91VD8 799 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Golm1Q91XA2 393 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Rnf111Q99ML9 989 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Upk1aQ9D132 257 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Lrrc71Q9D3W5 558 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Cyp3a41aQ9JMA7 504 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 CdylQ9WTK2 593 aa16.37■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gm43518A0A0G2JGB6 165 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 A630010A05RikA9C473 232 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 4930426L09RikE9Q0N7 123 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 SprtnG3X912 497 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Vmn2r44L7N2E1 861 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Krt4P07744 525 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Pde6bP23440 856 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 FynP39688 537 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gdf3Q07104 366 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gramd1bQ80TI0 738 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Lyve1Q8BHC0 318 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Trerf1Q8BXJ2 1205 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tbc1d17Q8BYH7 645 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Galnt5Q8C102 930 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Sh3kbp1Q8R550 709 aaKnown RBP16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Smg8Q8VE18 991 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Snx29Q9D3S3 818 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Efcab9Q9DAM2 216 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Rmdn1Q9DCV4 305 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Il17rbQ9JIP3 499 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Grm3Q9QYS2 879 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ap4b1Q9WV76 738 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Znf106O88466 1888 aa16.36■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gm36028A0A0U1RPM1 299 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tmem245B1AZA5 876 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Zfp946F6VWU8 523 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gm3264L7N2C5 238 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Trdmt1O55055 415 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 ZfrO88532 1074 aaKnown RBP16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 P01668 110 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Sox8Q04886 464 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Q3UJP5 209 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Zbtb8osQ505B7 168 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ptpn14Q62130 1189 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Arl5cQ6P068 179 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 DgkqQ6P5E8 934 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Stk40Q7TNL3 435 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gpr139Q80UC8 345 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Eif4bQ8BGD9 611 aaKnown RBP16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Kctd13Q8BGV7 329 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Kcns3Q8BQZ8 491 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Itpk1Q8BYN3 419 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Nmur2Q8BZ39 395 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Bend5Q8C6D4 421 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Snapc1Q8K0S9 389 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Olfr356Q8VFP5 315 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Pcdhb13Q91Y06 796 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Psmd9Q9CR00 222 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Neurl2Q9D0S4 285 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Znf687Q9D2D7 1237 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Syt5Q9R0N5 386 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Tnni1Q9WUZ5 187 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gm28168A0A087WNP1 180 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Gm14401A2ARV7 303 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Vmn2r5K7N788 911 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Foxm1O08696 760 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Mrgprb1Q3UG61 350 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ndst1Q3UHN9 882 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Axdnd1Q3UZ57 424 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Cln3Q61124 438 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Slc20a1Q61609 681 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Nlrp9cQ66X01 1004 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Ahcyl2Q68FL4 613 aaKnown RBP16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Brsk2Q69Z98 735 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Klhl14Q69ZK5 630 aa16.35■□□□□ 0.21
Ttc39b-202ENSMUST00000048274 Prmt6Q6NZB1 378 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms