RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Marveld2Q3UZP0 555 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Them6Q80ZW2 207 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dlgap2Q8BJ42 1059 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cpsf7Q8BTV2 471 aaKnown RBP11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ctxn3Q8BXZ0 80 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nrbf2Q8VCQ3 287 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pcdhgb1Q91XX8 918 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc13a3Q91Y63 600 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 St7Q99M96 577 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Sh2d4aQ9D7V1 421 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 ParvbQ9ES46 365 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Piwil1Q9JMB7 862 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Acox2Q9QXD1 681 aa11.05□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f15A0A087WR44 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f12A0A0A0MQP3 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f9A2BFZ7 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f7A2BHG6 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f19A2CG71 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f10A2CG92 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f3A2CGC2 496 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f13B8JKF6 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f2J3QMS5 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f25J3QMV9 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f6J3QMW9 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f26J3QNK2 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f24J3QNQ5 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f8J3QQ50 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f17L7MU81 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f18L7MU83 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 SpibO35906 267 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gad2P48320 585 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fdft1P53798 416 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cdh5P55284 784 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Adcy6Q01341 1165 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f14Q1LZI5 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Btbd35f27Q5FWA1 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nipal1Q8BMW7 416 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 IrgcQ8C262 412 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ddx18Q8K363 660 aaKnown RBP11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tmem82Q8R115 356 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Guca1bQ8VBV8 201 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 GMCL1P1Q99N64 498 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mpp6Q9JLB0 553 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ltn1Q6A009 1767 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 D3Z070 196 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Adgrf2E9Q4J9 644 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nkx1-1G3UXB3 402 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Grip2G3XA20 1042 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gjd2O54851 321 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cldn5O54942 218 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Htr2cP34968 459 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 FpgsP48760 587 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc12a1P55014 1095 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trim67Q505D9 768 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ephx4Q6IE26 359 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Arhgap26Q6ZQ82 814 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gxylt2Q810K9 444 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zbtb33Q8BN78 671 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trps1Q925H1 1281 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Clic3Q9D7P7 237 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Smg9Q9DB90 520 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fbxo17Q9QZM8 286 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Adamtsl1Q8BLI0 1745 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 A0A1Y7VP24 259 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Skint7A7XV04 395 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm6685D3YYP3 228 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Olfr220E9Q050 325 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 NumblO08919 604 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fitm2P59266 262 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Serpina5P70458 405 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trim62Q80V85 475 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Nox1Q8CIZ9 591 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cys1Q8R4T1 145 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ankrd49Q8VE42 238 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ndufa10Q99LC3 355 aaKnown RBP11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Clvs1Q9D4C9 354 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 DpysQ9EQF5 519 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cog8Q9JJA2 640 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Thap11Q9JJD0 305 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Scamp5Q9JKD3 235 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dcun1d1Q9QZ73 259 aa11.04□□□□□ -0.64
Msh3-201ENSMUST00000022220 Adamts6D3Z1A5 1117 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Trim5E9PV98 497 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Scamp3O35609 349 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pknox1O70477 436 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 HdcP23738 662 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Eif2dQ61211 570 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cnot6Q8K3P5 557 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rpl17Q9CPR4 184 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rgs10Q9CQE5 181 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gemin2Q9CQQ4 269 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Srfbp1Q9CZ91 441 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slamf8Q9D3G2 278 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tmem86aQ9D8N3 241 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Magel2Q9QZ04 1284 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rps6kb2Q9Z1M4 485 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Dthd1E9PZX1 795 aa11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Zbtb11G5E8B9 1050 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Myl4P09541 193 aaKnown RBP11.03□□□□□ -0.64
Msh3-201ENSMUST00000022220 Acsl1P41216 699 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms