RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Dis3lQ8C0S1 1053 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tasp1Q8R1G1 420 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pcdhb10Q91VE5 797 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Xpo5Q924C1 1204 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rnf111Q99ML9 989 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Thap12Q9CUX1 758 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Serpina9Q9D7D2 418 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Erap1Q9EQH2 930 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dach1Q9QYB2 751 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gon4lQ9DB00 2260 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm4924A0A1B0GR71 966 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gm12794L7MTS5 483 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gm6502L7N456 481 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ptpn9O35239 593 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 NppaP05125 152 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dlx2P40764 332 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tnni3P48787 211 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ak8Q32M07 479 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Stx3Q64704 289 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Galnt7Q80VA0 657 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Rab39aQ8BHD0 217 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pou6f2Q8BJI4 691 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Prkaa2Q8BRK8 552 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Phactr3Q8BYK5 558 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Fam151aQ8QZW3 608 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Smg8Q8VE18 991 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pcdhb13Q91Y06 796 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gpr45Q9EQQ4 373 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 IdeQ9JHR7 1019 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sv2aQ9JIS5 742 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 PolmQ9JIW4 496 aa11.71□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Smok3aC0HKC8 504 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Smok3bC0HKC9 504 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mtx3D3YTP3 312 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Bcl7cO08664 217 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Asna1O54984 348 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dpy19l2P0CW70 773 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tac1P41539 130 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 ItgavP43406 1044 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 VegfaQ00731 214 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Trim71Q1PSW8 855 aaKnown RBP11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Trim38Q5SZ99 471 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Vat1lQ80TB8 417 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Polr2eQ80UW8 210 aaKnown RBP11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pnma2Q8BHK0 365 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Eme1Q8BJW7 570 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Hsdl1Q8BTX9 330 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 ClmnQ8C5W0 1052 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Yod1Q8CB27 343 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Crtc3Q91X84 619 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Emc2Q9CRD2 297 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Rnaseh2aQ9CWY8 301 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cst12Q9DAN8 128 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 FibpQ9JI19 357 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Acsl4Q9QUJ7 711 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Itgb4A2A863 1818 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mllt3A2AM29 569 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Atp8b4A2ANX3 1194 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Emp3O35912 163 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Serpina3kP07759 418 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Lamp2P17047 415 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 LipeP54310 759 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Atf4Q06507 349 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ubxn2bQ0KL01 331 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tll1Q62381 1013 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gdpd5Q640M6 607 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ric8bQ80XE1 520 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Hyal5Q812F3 526 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Chst8Q8BQ86 417 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Creb5Q8K1L0 357 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Rab15Q8K386 212 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Oas3Q8VI93 1138 aaKnown RBP11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Nek8Q91ZR4 698 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ndufa5Q9CPP6 116 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kbtbd12Q9D618 625 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Padi4Q9Z183 666 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kmt2eQ3UG20 1868 aa11.7□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Polr2aP08775 1970 aaKnown RBP11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 AlyrefO08583 255 aaKnown RBP11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Il12bP43432 335 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Aldh3a1P47739 453 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 DbtP53395 482 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Txnl4aP83877 142 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pla2g6P97819 807 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ccdc69Q3TCJ8 202 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Spdye4aQ5IBH6 268 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 RgnQ64374 299 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Q80ZQ3 298 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 SynbQ8BI41 618 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dnali1Q8BVN8 258 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mettl24Q8CCB5 363 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Snapc1Q8K0S9 389 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Plcl2Q8K394 1128 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pcdhb8Q91XZ2 779 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Far1Q922J9 515 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gbe1Q9D6Y9 702 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tmx2Q9D710 295 aaKnown RBP11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cldn22Q9D7U6 220 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Olig1Q9JKN5 260 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 DgkeQ9R1C6 564 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms