RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Cd2P08920 344 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Myl4P09541 193 aaKnown RBP11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 CalrP14211 416 aaKnown RBP11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 ArvcfP98203 962 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Krt80Q0VBK2 452 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Prmt9Q3U3W5 846 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 OtulinQ3UCV8 352 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 MyorgQ69ZQ1 716 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Mvb12bQ6KAU4 317 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Olfr1128Q7TR47 311 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Pcsk9Q80W65 694 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Rbm22Q8BHS3 420 aaKnown RBP11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 GrpQ8R1I2 146 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Znf622Q91VY9 476 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Rwdd4Q9CPR1 188 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Psmd9Q9CR00 222 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Agpat3Q9D517 376 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Actrt2Q9D9L5 377 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 D7h11orf16Q9JJR6 402 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Trpc4Q9QUQ5 974 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 PignQ9R1S3 931 aa11.12□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Lama2Q60675 3118 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Igkv5-43A0A0B4J1J2 115 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Gm5930D3Z257 264 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 C130060K24RikG3UWA8 416 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Fen1P39749 378 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Tbc1d10aP58802 500 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Fbp2P70695 339 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Caprin2Q05A80 1031 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 ChukQ60680 745 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Fzd6Q61089 709 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Gstt2Q61133 244 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Ino80dQ66JY2 873 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Paqr6Q6TCG5 343 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Tmtc3Q8BRH0 920 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Zfp398Q8BV16 643 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 KyQ8C8H8 661 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Barhl2Q8VIB5 384 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Tbrg4Q91YM4 630 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Pde6cQ91ZQ1 861 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Lysmd3Q99LE3 305 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 LiasQ99M04 373 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Sike1Q9CPR7 207 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Retreg3Q9CQV4 466 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Oser1Q9D722 291 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Pak1ip1Q9DCE5 382 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Erap1Q9EQH2 930 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Kdelc1Q9JHP7 502 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Sept5Q9Z2Q6 369 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Per3O70361 1113 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 UmpsP13439 481 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Gdf5P43027 495 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Vps4bP46467 444 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Ranbp9P69566 653 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 PrkcqQ02111 707 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Brms1lQ3U1T3 323 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 AcrbpQ3V140 540 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Mtnr1aQ61184 353 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Chi3l1Q61362 389 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Stx3Q64704 289 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Nlrp9cQ66X01 1004 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Fnip1Q68FD7 1165 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Shkbp1Q6P7W2 704 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Cand2Q6ZQ73 1235 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Tmem74Q8BQU7 305 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Trerf1Q8BXJ2 1205 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Slco6c1Q8C0X7 706 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Abi1Q8CBW3 481 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Lrif1Q8CDD9 755 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Ifi205aQ8CGE8 404 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Ero1aQ8R180 464 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Dync1li1Q8R1Q8 523 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Trim7Q923T7 510 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Chchd3Q9CRB9 227 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Rpl34Q9D1R9 117 aaKnown RBP11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Vmn1r65Q9EPS7 332 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 HemgnQ9ERZ0 503 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Sept6Q9R1T4 434 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Slc2a5Q9WV38 501 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 MycsQ9Z304 431 aa11.11□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Taf4E9QAP7 1042 aaKnown RBP11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Pcsk6F6XJP7 959 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Klf6O08584 283 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Odc1P00860 461 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 ChgbP16014 677 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Kcna3P16390 528 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Gabrb3P63080 473 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 AurkaP97477 395 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Gspt2Q149F3 632 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Samd11Q1RNF8 542 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Fubp3Q3TIX6 575 aaKnown RBP11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Klra8Q60682 266 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Slc6a4Q60857 630 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Igfbp7Q61581 281 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Arhgap20Q6IFT4 1182 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Acap2Q6ZQK5 770 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Dpy19l3Q71B07 716 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Znf473Q8BI67 892 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Slc18a2Q8BRU6 517 aa11.1□□□□□ -0.63
Cfap54-201ENSMUST00000020200 Taf10Q8K0H5 218 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms